G96148


Basic Information

Item Value
gene id G96148
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4390840 ~ 4392980 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU119901
AGCAGGTAAGTCAGACCAAGGACCTTTGTATGCCTTCAGCCGATTGTAATGTACAATCCATGATTTGGATCGTGGATCTTTTGGGTCAGTGATTTCATAGGTCACGCCAGGACAACCATCTTTATCCACCCTCTTCAGAACTCTATACGGCCCTTTCCATCTAGGAGCAAGTTTATTCCTTTGATTGGCAGGATCATCAAGGAAAACAAGATCACGTTCAGCATAGGGATTAAAAGCAAGCTTTTGATCATAGTGAGTCTTTTGCAGTAGTTTAGATTCTTTCGACTGCTCAGCGGCCATGTCAAAAGCATGTGACAGGCGGTTAAGGACATCCTGGGCATAAGCAGCAGGTGTGCCCGGAGTTGCTTGAGTAGTGAATGGACTGCAGTTCAACAAAACGTCCACAGGCAGATGAGGTTCCCGACCATGAGCAAGGAAAAATGGAGTATATCCAGTACTGGAATGTACACTTGAATTGTACGCAAGTTCCACCTGTGAGAGGTATTTGTCCCATTCTCCTCCATTTTGGTAGATGTATTTAGCTAATTGGTCTTTTAATGTCCGGTTCAGTCTTTCTACCATGCCATCTGATAGGGCATTGTATGGAGATGTTCGTGTCTTCTCAATTCCCAACTTGCTACACAGCTGCCTCACCAGATCAGACTCAAACTGTCTGCCCTGGTCAGTGTGGATGGACTCAGGTATGCCATGTTGACGAATGAAGTCTTCAAACAAGCATTGAGCTACACTTGTTGCACGCTGATCTTTTAAAGGAAAGAGATTCACATAGCGTGTAAAATAATCCATTACAACAAGAACATACCTGTTGCCTTGTGAAGTGACTGGTAGCTTGGTGAGGTCAGCAGCAATTTTCTGGAATGGACGATCCACCACAATAGGTTGTAAAGGAGCTCTAGCTTTTGGTGTTGGAGCACTGCGAGTCTGACATGTTAAACACTCTGTACAGAACTTGTAAATTTCACGTGACATGTAAGGCCAATAGCAGATTTTTCTGGCTCTCTGCAAAGTTCGTTCAGTCCCTAAATGTCCACTGAAGACATTTCCATGCAGGTATTTGAGGGCTGTCTGAATGAGGGATTCAGGAAGGACCAATTGGTAAGTATAGGCTTTCTGCAGAAAGGTTTTAATTTTTCGACAGAGGATCCCATTTTCCGAAGTCAGGCGAGGAAACTCATACCAGAGCTTTTTCAGAGCTGACGGGGAGTTTTTGATTCATCGTGCAGTAGGTCTTCGGTTAtccatttctttccatttcatcaCAGTTCTCAGAATGACATCCGCTTGTTGTTTCTGCTTCAGTTCATCAATGTTTATTGCTAAATCTTCACAGGTTTGTCTTACAGGAACAGTTTGTTCAGGCTGTAGTTCAGAAGATCAACTGTTTTGCATCTTTTTGGGCAAAGTTTTTAACAAATCGTCTGTAATAGGAACAGAGACCCACAAAAGCTCTCACCTCAGTAGGTGTTCTTGGTGTTGGCCAATCTTTCACTTTGTCCAGCTTCCTGGAATCTGGTCTGAGACCACCCTTGGTGATTACATGTCCCAGAAAAGAGACTTCATCCCATGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119901 True 1591 lncRNA 0.44 2 4390840 4392980

Neighbor

gene id symbol gene type direction distance location
AMCG00015194 NA coding downstream 19665 4365436 ~ 4371175 (-)
AMCG00015191 psenen coding downstream 90637 4295433 ~ 4300203 (-)
AMCG00015192 NA coding downstream 97543 4290597 ~ 4293297 (-)
AMCG00015187 NA coding downstream 109211 4275770 ~ 4281629 (-)
AMCG00015186 NA coding downstream 133497 4256267 ~ 4257343 (-)
AMCG00015193 NA coding upstream 15505 4408485 ~ 4424905 (-)
AMCG00015195 NA coding upstream 43565 4436545 ~ 4452947 (-)
AMCG00015199 NA coding upstream 226384 4619364 ~ 4630222 (-)
AMCG00015202 LOC106605622 coding upstream 277724 4670704 ~ 4679051 (-)
AMCG00015209 NA coding upstream 477034 4870014 ~ 4871029 (-)
G96136 NA non-coding downstream 46771 4343868 ~ 4344069 (-)
G96134 NA non-coding downstream 53569 4337009 ~ 4337271 (-)
G96133 NA non-coding downstream 58068 4332515 ~ 4332772 (-)
G96132 NA non-coding downstream 61031 4329610 ~ 4329809 (-)
G96131 NA non-coding downstream 61442 4329096 ~ 4329398 (-)
G96208 NA non-coding upstream 275923 4668903 ~ 4669286 (-)
G96271 NA non-coding upstream 489089 4882069 ~ 4889321 (-)
G96300 NA non-coding upstream 501774 4894754 ~ 4911505 (-)
G96314 NA non-coding upstream 623406 5016386 ~ 5016609 (-)
G96318 LOC100846954 non-coding upstream 628280 5021260 ~ 5022065 (-)
G96094 NA other downstream 210399 4174879 ~ 4180441 (-)
AMCG00015180 NA other downstream 266877 4110319 ~ 4123963 (-)
AMCG00015164 NA other downstream 783648 3603683 ~ 3607192 (-)
G95921 NA other downstream 1040398 3349879 ~ 3350442 (-)
G95854 NA other downstream 1193651 3196421 ~ 3197189 (-)
G96191 NA other upstream 224731 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 385413 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 575070 4968050 ~ 4976350 (-)
AMCG00015211 NA other upstream 592592 4985572 ~ 5083187 (-)
AMCG00015230 NA other upstream 1001406 5394386 ~ 5463028 (-)

Expression


Co-expression Network