G96264


Basic Information

Item Value
gene id G96264
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 4876121 ~ 4879896 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120035
acaattggtaacacactacgccgtgaaggactgaaatcctgcagcgcccgcaacatgaaactgggtgaaagtgttgtggtcagatgagaccaaaatcgagctctttggcatcaattcaactcgccgtgtttggaggaggaggaatgaccccaagaaccgtcaaacatggaggtggaaacattatgctttgggggtgtttttctgctaaggggacaggaaaACTGCACctcatcaaagggacgatggacagGGCCATGTatcgtcaaatcttgggtgagaacctccttccctcagccagggcattgaaaatgggtcgtggatgggtattccagcatgacaatgacccaaaacacacagccaagccaacaaaggagtggctcaagaagaagcacattaaggtcctggagtggcctagccagtctccagaccttaatcccatagaaaatctgtggagggagctgaaggtatgagttgccaaacgtcagcctcaaaaccttaatgacgaggatctgcaaagaggagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgatatctgtgattgccaacaagggttttggcaccaagtactaagtcgaaggggtcaaatacttatttccctcattaacatgcaaatcaattcataacttttttgaaatgcgtttttctggatttttttgttgttattctgtctctcactgttaaaatacacctaccattaaaattatagactggtcatttctttgtcagtgggcaaacgtacaaaatcagcaggggatcaaatacttttttccctcactgtaaatatccCCTGATCTCATCCCTTTTCTCTTTTGCTGTCTCAACCCCCACCCCATTGCTTGCTGCCACCAGGCAAAGGAAATGTGGCAgtgagaagaaacaaacaagatgacCTGGAGGCCACGTACCAGGAACTCCAAGGCACAAGAAGCGATGTGTACAGCGATCTGAGGCAGCCACAGAAGTGAGCAGCGGGCGGAGTTGCGGGGGTTGTAATTATTGACACTGAGCATTAACAAGGAAGCGGACACAGGGCTTTGGTAGTGGGGTGGACCACAAGTTTAATAGGGTCTAGTATAGGCCTACTATTGGCCTATGCCactgtattcctttttttatttaaagaaatgtaagtATCCAAAACAAAAGATTCATTACAACACATTTGTCCCCAGATCCCGCCAATCCCCGCCCCTACCCCTCAGCCTCATGGTAATTAAGACTcttcatgtttacattttttctcaaaccaccttaaaaaaaataaacattggatTTGAAAACTTGAATACTGTGGCAATCCTTCTGAGCGACAGCAGGAGGGATACTGTGCAGTCCAGTCCGGTGTCAAGGGACCAGTCTTTTGGCGTACTGTATGAGGTTTGTCAGATGGGAAATGGAGTCCAATCAGGGGGGGTTCTGAACATACGAACTATGCTTGGAGTTGCCCTGAGAGTCATCAGTAGATGCGGATGAAGGTCAAGGACAAGACATGGgaaagagagtgtgtgagagggCCATGAGGGGATGGCCAAGATTCCAAAATCAGGTCAGTGACTGGTACTTGACAGACTCCGCCCTCTGAAACACGGTCGCCAATGCCACTCATATATCCAGTCAGGCTGTCCATAACCGATGTCAACACCAGGGTTCCTCCCTCCCCCACAGTGAGAGACTGTCCAATTCCAACAGGTTGCCCTGTGCTCATGTGTCCATTGGACTTCTCTTCAGTTGGCACGTGAATTACACATTTCTGGAGATACAGTGCAAAAACAACTCAATAGCCTTCTCTTTTTCCGAGTAGTTAAGCTTCCTTAGCTGTTTGGACTAATACATAAGTGCTACACATTCAGTCTATGCAGTCTTTATGATTTCAGAGATGTCCCGGATGACGTCTAATCAGATTGCAAAGAGTTAAAAGCAAGAATCAAGTAAAATGCCATTTCAAAGTACATTTGTAAGTACAGCTtgaaaatagaagaaaatatattgtactaaataagaatatatatttagtattcagataatatttctgaaatgaaTTGTAACTGGACAAATGTATTCCctatattcaaaatgtatgttttgtaatttatttgtatacagtgtatatatacacacacatgcacagtactgtgcaaaagttttaggcaaaGGGTactcacaccaaatatggatttgatttagatttttcttatgttcactcactttgcatttagttaattgataaacataatctattaacatgtctatttttgaaaacattcttactttacagcattttttcacacgtctaaaacttttacacagtactgtacgTGTTTCTAATTGATTCCAAAATTACTGCATTATATGTAATCTATGcaatttgtgaaatatttcaaCAAAGCCTTTTAAGATTGTGCTGTACAGATCCTTTGTAGCTTTCTGAAATTGTGAATaatgtttgcatatttaaacatcTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120035 True 2516 TUCP 0.42 2 4876121 4879896

Neighbor

gene id symbol gene type direction distance location
AMCG00015205 NA coding upstream 14305 4846954 ~ 4861816 (+)
AMCG00015204 NA coding upstream 37751 4806896 ~ 4838370 (+)
AMCG00015206 NA coding upstream 69736 4804650 ~ 4806385 (+)
AMCG00015201 NA coding upstream 93691 4768539 ~ 4782430 (+)
AMCG00015200 NA coding upstream 110662 4743497 ~ 4765459 (+)
AMCG00015207 NA coding downstream 72541 4952437 ~ 4957869 (+)
AMCG00015213 NA coding downstream 162605 5042501 ~ 5047188 (+)
AMCG00015218 NA coding downstream 184424 5064320 ~ 5065243 (+)
AMCG00015214 NA coding downstream 249445 5129341 ~ 5136836 (+)
AMCG00015221 NA coding downstream 439662 5319558 ~ 5351935 (+)
G96205 NA non-coding upstream 205946 4669472 ~ 4670175 (+)
G96204 NA non-coding upstream 206731 4668893 ~ 4669390 (+)
G96203 NA non-coding upstream 207337 4668322 ~ 4668784 (+)
G96083 NA non-coding upstream 482652 4388148 ~ 4393469 (+)
G96072 NA non-coding upstream 575889 4299906 ~ 4300232 (+)
G96326 NA non-coding downstream 156142 5036038 ~ 5036271 (+)
G96384 NA non-coding downstream 314076 5193972 ~ 5194179 (+)
G96424 NA non-coding downstream 577937 5457833 ~ 5459048 (+)
G96512 NA non-coding downstream 872272 5752168 ~ 5753255 (+)
G96513 NA non-coding downstream 875187 5755083 ~ 5755350 (+)
AMCG00015197 NA other upstream 209063 4583697 ~ 4667058 (+)
G96030 NA other upstream 775981 4089201 ~ 4100140 (+)
G95992 NA other upstream 904438 3969829 ~ 3971683 (+)
AMCG00015173 NA other upstream 926701 3933916 ~ 3949420 (+)
AMCG00015170 NA other upstream 959387 3903699 ~ 3916734 (+)
G96317 LOC100846954,LOC107575789 other downstream 141470 5021366 ~ 5022052 (+)
AMCG00015212 NA other downstream 188151 5068047 ~ 5077903 (+)
AMCG00015215 NA other downstream 204678 5084574 ~ 5119401 (+)
G96415 NA other downstream 509041 5388937 ~ 5391723 (+)
G96420 NA other downstream 546983 5426879 ~ 5465434 (+)

Expression


Co-expression Network