G96317 (LOC100846954,LOC107575789)


Basic Information

Item Value
gene id G96317
gene name LOC100846954,LOC107575789
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5021366 ~ 5022052 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120099
acctgtataaaagacacctgtccacagaagcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaatgggctacaagaccatcaccaagcagcttggtgagaaggtgacaacagttggtgcgattattcgcaaatggaagaaacacaaaataactgtcagtctcccttggtctggggctccatgccagatctcacctcgtggagtttcaatgatcatgagaatgaaatcctgcagggaccgcaaggtccccctgctcaagaaagcacatgtacaggcccgtctgaagtttgccaacatctgaatgattcagaggagaactgggtgaaagtgttgtggtcagatgagaccaaaatcgagctctttggcatcaactcaactcgccgtgtttggaggaggaggaatgaccccaagaacaccatccccaccgtcaaacatggaggtggaaacattatgctttgggggtgtttttctgctaaggggacaggacaactgcaccgcatcaaagggacgatggg

Function

NR:

description
transposase-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120099 True 575 TUCP 0.49 2 5021366 5022052

Neighbor

gene id symbol gene type direction distance location
AMCG00015207 NA coding upstream 63497 4952437 ~ 4957869 (+)
AMCG00015205 NA coding upstream 159550 4846954 ~ 4861816 (+)
AMCG00015204 NA coding upstream 182996 4806896 ~ 4838370 (+)
AMCG00015206 NA coding upstream 214981 4804650 ~ 4806385 (+)
AMCG00015201 NA coding upstream 238936 4768539 ~ 4782430 (+)
AMCG00015213 NA coding downstream 20449 5042501 ~ 5047188 (+)
AMCG00015218 NA coding downstream 42268 5064320 ~ 5065243 (+)
AMCG00015214 NA coding downstream 107289 5129341 ~ 5136836 (+)
AMCG00015221 NA coding downstream 297506 5319558 ~ 5351935 (+)
AMCG00015223 NA coding downstream 372328 5394380 ~ 5398379 (+)
G96205 NA non-coding upstream 351191 4669472 ~ 4670175 (+)
G96204 NA non-coding upstream 351976 4668893 ~ 4669390 (+)
G96203 NA non-coding upstream 352582 4668322 ~ 4668784 (+)
G96083 NA non-coding upstream 627897 4388148 ~ 4393469 (+)
G96072 NA non-coding upstream 721134 4299906 ~ 4300232 (+)
G96326 NA non-coding downstream 13986 5036038 ~ 5036271 (+)
G96384 NA non-coding downstream 171920 5193972 ~ 5194179 (+)
G96424 NA non-coding downstream 435781 5457833 ~ 5459048 (+)
G96512 NA non-coding downstream 730116 5752168 ~ 5753255 (+)
G96513 NA non-coding downstream 733031 5755083 ~ 5755350 (+)
G96264 NA other upstream 141470 4876121 ~ 4879896 (+)
AMCG00015197 NA other upstream 354308 4583697 ~ 4667058 (+)
G96030 NA other upstream 921226 4089201 ~ 4100140 (+)
G95992 NA other upstream 1049683 3969829 ~ 3971683 (+)
AMCG00015173 NA other upstream 1071946 3933916 ~ 3949420 (+)
AMCG00015212 NA other downstream 45995 5068047 ~ 5077903 (+)
AMCG00015215 NA other downstream 62522 5084574 ~ 5119401 (+)
G96415 NA other downstream 366885 5388937 ~ 5391723 (+)
G96420 NA other downstream 404827 5426879 ~ 5465434 (+)
AMCG00015277 NA other downstream 1664299 6686351 ~ 6691799 (+)

Expression


Co-expression Network