G96531


Basic Information

Item Value
gene id G96531
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5786397 ~ 5788847 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120352
gtatttatttaaaaaaatgaaatctttataaatgtggaaaaaacagcttaattgtttactaaatgtggaaaaaaacacaaggtttaagttaaatgtgtgaaaaaagataCTCGGAaaaagtgtgcgctgttttacatATGCACCTCATATTTCTCAGGCTCAGCTTAACTACCTTGGTGATGAGCTTCTTgccaccaattgacacctcTCTGACTCATTTACTTGTCACTCTAACACAGCAGCTGAaatgaattaactacaattaaggcaaactaggacTCAGATTCACTTCAATTGAGGCAAgactaaaaacaagattagcaATGCTAAGAGTGTCTCACAGCAGaaatccaacaaaaaaaaagctttctctctctcacctgtcctttGTTTGACGTGTGTAACTCCTAAACAGTTCTATCAAAATCTAGACAACATTTTAAGGAAGGAagggacagaaaaaaacagctgGACCCAAAACGAGTTGGAAATGTAagttaaaatctaaaatgaagCAAAAGAGTATCAGTCAGGAGCCAGGAATATTGGCAGATTCAAGTTACAATTCCAATGAATatgatgattttattattattactcgtATTGTTAATGTATCAAAACAATTTTCtgattaacagcacatttatatttgtattaaattttcatgttttcacatttatgaAACCTATCCACATGAATTCAGTGTATTTAAGAGCCTGTTTAGCACGCATTTCATTTAACAGGAATTGCTTTGGAACCTCTCTCGTGCAAGAGACATGTATACCTGAATATGATACTGAGATTAAATGCAGGTGTTAGAATTATAGAATTTGAATCTACACAAAATGGTTGCTTAAGGTCTGATTATCCAAGTTGTGGTCAGTGACGTTTAATCTTCATAAATAGCTCTGTTCTTCAATAAAAAAGATGGGGGGGATAGTTGGAGGCAGGAAGTtaagaggagagggaggtggaAGTTGTGTTGGGGGCAGTGGGAAGTCCCTGTGTTTTCCTCATAAGGGTGAGGGAAGGCCCAGCAAACAGCAGAGCAACAGCGAGACTATGGAGCACAGTGGGGCAGCAGAGGGGGCAGAAGTGGAGGAGGGGACGCTCCTGATGGAGTGAGAGCAGACCCCCACATTCCCCACGGAGTCCACCGCCAGGATCTCCACCTCAGGCGCACAGCAGGAGGCACTGTAGCTGACCAGCGTCACGTTCCCACTGGCTCCTCCGCTCTCCTGCGTCGTGTTCAGTGTGCCGTTGCCCAGGTGGGTGAAGACGCGCACCACTGCTGAGCGATTATCCCGGATCTCGGCCTGCAGGGACCACTCCTCCAGGCCACAGGGGAAGGAGCAGTTCTCTGACACATGGGTCACCTGACAGGCTGGGGGCACAAAGTCGTCAAC

Function

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120352 True 1406 lncRNA 0.43 2 5786397 5788847

Neighbor

gene id symbol gene type direction distance location
AMCG00015243 NA coding downstream 92333 5691658 ~ 5694064 (-)
AMCG00015240 NA coding downstream 244914 5540664 ~ 5541483 (-)
AMCG00015239 NA coding downstream 246341 5537803 ~ 5540056 (-)
AMCG00015238 NA coding downstream 248602 5537345 ~ 5537795 (-)
AMCG00015233 NA coding downstream 271572 5509511 ~ 5514825 (-)
AMCG00015249 NA coding upstream 21187 5810034 ~ 5826236 (-)
AMCG00015248 NA coding upstream 39901 5828748 ~ 5843272 (-)
AMCG00015250 NA coding upstream 56329 5845176 ~ 5849429 (-)
AMCG00015247 NA coding upstream 76197 5865044 ~ 5880190 (-)
AMCG00015251 NA coding upstream 111747 5900594 ~ 5913937 (-)
G96452 NA non-coding downstream 226798 5398094 ~ 5559599 (-)
G96479 NA non-coding downstream 228892 5557251 ~ 5557505 (-)
G96462 NA non-coding downstream 321073 5432605 ~ 5465324 (-)
G96459 NA non-coding downstream 321730 5427736 ~ 5464667 (-)
G96458 NA non-coding downstream 322541 5426879 ~ 5463856 (-)
G96532 NA non-coding upstream 3556 5792403 ~ 5792614 (-)
G96609 NA non-coding upstream 138612 5927459 ~ 6032127 (-)
G96642 NA non-coding upstream 329774 6118621 ~ 6119653 (-)
G96643 NA non-coding upstream 331807 6120654 ~ 6121002 (-)
G96650 NA non-coding upstream 368256 6157103 ~ 6223629 (-)
AMCG00015244 NA other downstream 29288 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 323369 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 703210 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 810047 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 983493 4778393 ~ 4802904 (-)
AMCG00015257 NA other upstream 236521 6025368 ~ 6072125 (-)
AMCG00015256 NA other upstream 260630 6049477 ~ 6064159 (-)
AMCG00015267 NA other upstream 579907 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 621800 6410647 ~ 6419481 (-)
G96766 NA other upstream 910010 6698857 ~ 6700357 (-)

Expression


Co-expression Network