G96568


Basic Information

Item Value
gene id G96568
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6025345 ~ 6067602 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120401
tttttttttttttttttttttttttttttttttTTGGGCATGACACTTCGTTCGTCTTTATTGGACATTCATTTCtcattataaacaaaattaattgctGAGTTCATAAATTTGAAACCATTAGAAAGGGAGAATCCTGGTCAATATCCAGTGTGGCTGGGAGAGGGTGGGGCCTGAGAGAAAGACCCCTCCCTGACAGAACAGCTTCCAATGGAAAGAGCTGATTCTATTTGCGCCCCACCCTCCATACCAAACCCCACCACCGTTCCCATCTTTGTCCCTGTGGCGACAGCGAATCAGAATCAGTCCGGTTGGATTTAGCTCATTTGCCAGCTTTTCTGTGATgggcagaaagagagaaagagtgatgaaaaaaaaatacataattacccTCCATTCCAAAATGATACTTGCCACAATTAAACACATAGCTTACTTCCCTCCACCACTCCATCGCCTTGTACAAATAGAGAAATTGTTGAATTTCTTTCCATCGTACTTCCTGTATGATCATCGGTGTGTGGATGAGACCCTGCATGAAGCAGTAAACCAAGCCACCTGACaatggtgtttgtgtctgctccatTATGTGTTTGGTATTGTGTTCCAATTGTACTACGTCAATACTTCTTCTTGTTGTATACggtatatttaaatgcattttttcaggTCTATTAACTATTTCCTAATCATATTCAACATCTTTCTAAACTCTCTTGATgttgctgtctgtctctcttcctcacttactcacactcacacatatttacaagcaatataaaaaatataaaaaaattgaGGTATCATTTTAGGAAAAAATATTCAAGAACACAGGAACTCAGGAACTAGGAAATCAATACTTACTTCCCACCCCATTTGCACGAGTCCCCAAAAAAGAACCACTActccacaaacaaaaaatataacaaagaaGACCAATCCACCGATGCGCAGCCTATCCCAGTCTAGGGAGAgaagaatagaaaataaacacacagttgGGAACCTCTCTGGGCAAAACACAGGACCCCATGTGGTAGAGAGTAGTTAATAAATCAATAGATCAATGAAGACATGAACTAATGTTTCAGTTAATAAATACTACTGttacaacaactactactactactactactgctaataataataataataataataataataataagtgtatgttttcaatttgattAATGTCTTCTATTTTGTTACCTTGGGACAGATTAGGCATGGATTTCTTTCAAGGTTAAAGAATACCCCGTTTTGTGGGACAGGGGGGACAGTGCATCCTATGGCCACCCTACCTCTATCATGCTAGGTGCAGTAGAAGAGTTGTCTTACCATACGTAAAAGCATCTGAATAGGGGGAGAAtggggagggagaaaaagaaaagagaacatTTAGCAGCTGGACAGCACACAAAATAATCTTCTCATTGGGCTTTGACACAGTGGTCTCTAATGCTGGTCCTGGAGATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120401 True 1480 lncRNA 0.38 3 6025345 6067602

Neighbor

gene id symbol gene type direction distance location
AMCG00015255 NA coding upstream 7103 6005307 ~ 6018242 (+)
AMCG00015252 NA coding upstream 53230 5959682 ~ 5972115 (+)
AMCG00015245 NA coding upstream 214416 5798493 ~ 5810929 (+)
AMCG00015246 NA coding upstream 236974 5772857 ~ 5788371 (+)
AMCG00015242 NA coding upstream 303680 5713705 ~ 5721665 (+)
AMCG00015262 NA coding downstream 77209 6144811 ~ 6157310 (+)
AMCG00015264 NA coding downstream 181560 6249162 ~ 6257319 (+)
AMCG00015265 NA coding downstream 219983 6287585 ~ 6297209 (+)
AMCG00015263 NA coding downstream 235681 6303283 ~ 6309661 (+)
AMCG00015268 NA coding downstream 243364 6310966 ~ 6312632 (+)
G96543 NA non-coding upstream 106222 5865044 ~ 5919123 (+)
G96513 NA non-coding upstream 269995 5755083 ~ 5755350 (+)
G96512 NA non-coding upstream 272090 5752168 ~ 5753255 (+)
G96424 NA non-coding upstream 566297 5457833 ~ 5459048 (+)
G96384 NA non-coding upstream 831166 5193972 ~ 5194179 (+)
G96591 NA non-coding downstream 50013 6117615 ~ 6118160 (+)
G96668 NA non-coding downstream 203735 6271337 ~ 6273388 (+)
G96671 NA non-coding downstream 207766 6275368 ~ 6275601 (+)
G96697 NA non-coding downstream 311169 6378771 ~ 6385567 (+)
G96710 NA non-coding downstream 361987 6429589 ~ 6431235 (+)
G96420 NA other upstream 559911 5426879 ~ 5465434 (+)
G96415 NA other upstream 633622 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 905944 5084574 ~ 5119401 (+)
AMCG00015212 NA other upstream 947442 5068047 ~ 5077903 (+)
G96317 LOC100846954,LOC107575789 other upstream 1003293 5021366 ~ 5022052 (+)
AMCG00015277 NA other downstream 618749 6686351 ~ 6691799 (+)
AMCG00015293 NA other downstream 929995 6997597 ~ 7080788 (+)
G97006 NA other downstream 1347767 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 1878606 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 2006579 8074181 ~ 8078832 (+)

Expression


Co-expression Network