G96609


Basic Information

Item Value
gene id G96609
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5927459 ~ 6032127 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120450
gtgtctttaTGAAGAGTGAGGAATGGTCAGTACTCACAGAGGCTTTGTCAATGCTGAGGAAGACTCCAGTGGACTCCACCACGTACAGCGCCCCACAGTCTCCCCAGGGGATTTCCGCTGGCTTCatactgaggagagggaggaggggggggATTCCAATAATTATACAAACATGAAGAATATTAATGATTAAACAACAATCTCTTGCAATAAGGAACACTTGTGGCAAGCACACCATTTGACAAACAAGAGGAGATATatagggagagagggggaggaggaggaggggtgtgtgtgttagaaCAGTACTacagcactatatatatatatatatatatatatataaatatatatc
>TU120451
TGaagacaatttaaaataaacacacaaactctGACACATTTTCtcctaatatatttatttgtaaaatcgCAACATTTGGTATTTCCAGTAATGCATGGATGTACTTctatttgtacatatttttttttgcttgtagTTGACATTAGTAAAGCTGGAGttcacagaaagaaaggcaggcaatatttgtatatttaccaTATACAGATTATAGTGTAGTGAGCAGAGGGTAGTGCAGTGATCTCGAGCCTcgctaagaggcctgggcctttcACTGATGCGGTGAGATCTCTGCACTGTGGTGTAGGAgcacagaagacaaaggagaagGTTTCCCAACAGTCAGCCTGGCAGAAAGAATTGGTCAAGACATCTCTACTCTTCACTTGGGTCTTTTTATCTGTTTTCCACATTGCTTGGCTTCTAAAGCTGCTAGATGCCATTATACTAAGGGGTCTAGATGTGCTCTGGTGGCTGGTCAGGACAGGCAGGTTTGATCCATTGGGGTCTGTATTCTGCCCTGCTTGAATGACTTCAACTTGCTTGTACTGTTACTACATGCTGCATGCTTCCAACactgtttaattgtgttgtGATGTGTTAAATTGTACTGTGTccaattgcattgtattgtgcAGCTTTGCATGgagttgtgttgtattgtactctagtatttgcactgtatttaaCACTTGTGTTGCTTTGCAGTTCTATTAATAGGACTGTGGAATATCGCTCTGTTTTGTAATGGACTGTGCTGTGGGGATCTCTGCATTGTTTTTTCACTTGTATTCTCTACCTGCTGTTGCGAGAAGCAAAATCAGTGTTTTGTGTCATCTGGaatagacacatttaaaaaataaagtaataattaagAGAAAAGAACAGATCTGTATCTAAACATAATTACTTTGGAGATTCCAATAATTATACAAACATGAAGAATATTAATGATTAAACAACAATCTCTTGCAATAAGGAACACTTGTGGCAAGCACACCATTTGACAAACAAGAGGAGATATatagggagagagggggaggaggaggaggggtgtgtgtgttagaaCAGTACTacagcactatatatatatatatatatatatatatatatatatttata

Function

GO: NA

KEGG:

id description
ko00100 Steroid biosynthesis
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU120450 False 355 lncRNA 0.43 3 5927459 6032127
TU120451 True 1119 lncRNA 0.38 2 5937423 5972170

Neighbor

gene id symbol gene type direction distance location
AMCG00015251 NA coding downstream 13522 5900594 ~ 5913937 (-)
AMCG00015247 NA coding downstream 47269 5865044 ~ 5880190 (-)
AMCG00015250 NA coding downstream 78030 5845176 ~ 5849429 (-)
AMCG00015248 NA coding downstream 84187 5828748 ~ 5843272 (-)
AMCG00015249 NA coding downstream 101223 5810034 ~ 5826236 (-)
AMCG00015260 NA coding upstream 46096 6078223 ~ 6083491 (-)
AMCG00015259 NA coding upstream 52750 6084877 ~ 6097018 (-)
AMCG00015261 NA coding upstream 91973 6124100 ~ 6144724 (-)
AMCG00015270 dyrk1b,LOC106605641,LOC106578455,LOC107685988,LOC107737818,LOC107666783 coding upstream 398491 6430618 ~ 6440642 (-)
AMCG00015272 fbl,LOC107719117,LOC107666874,LOC102785674,LOC107737817 coding upstream 456315 6488442 ~ 6501219 (-)
G96532 NA non-coding downstream 134845 5792403 ~ 5792614 (-)
G96531 NA non-coding downstream 138612 5786397 ~ 5788847 (-)
G96479 NA non-coding downstream 369954 5557251 ~ 5557505 (-)
G96462 NA non-coding downstream 462135 5432605 ~ 5465324 (-)
G96459 NA non-coding downstream 462792 5427736 ~ 5464667 (-)
G96642 NA non-coding upstream 86494 6118621 ~ 6119653 (-)
G96643 NA non-coding upstream 88527 6120654 ~ 6121002 (-)
G96650 NA non-coding upstream 124976 6157103 ~ 6223629 (-)
G96653 NA non-coding upstream 196387 6228514 ~ 6228776 (-)
G96696 NA non-coding upstream 322893 6355020 ~ 6362409 (-)
AMCG00015244 NA other downstream 170350 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 464431 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 844272 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 951109 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 1124555 4778393 ~ 4802904 (-)
AMCG00015256 NA other upstream 17350 6049477 ~ 6064159 (-)
AMCG00015267 NA other upstream 336627 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 378520 6410647 ~ 6419481 (-)
G96766 NA other upstream 666730 6698857 ~ 6700357 (-)
AMCG00015283 NA other upstream 838335 6870462 ~ 6877734 (-)

Expression


Co-expression Network