G96643


Basic Information

Item Value
gene id G96643
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6120654 ~ 6121002 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120497
NtttgaagacttgaatcaagtccccacatagtttcctctgttccagggtgaaaagattcagttccctcagtctctccgagtgggacattcccttcagacctggaataagtctggttgccaagaactgtacacagtatccagatgagctctaactaatgcattgtacagtcttaacattactgcccttgttttaaattctacacNNNNNNNNNNataccctaacattctgtttgacttttttattgcttccccacattgttagGAGTCTACATAGACTCCTAAGTCTTTCTcgtgcgttacttcatctagttctattcctcctatagtgtaattataatggacatttttg

Function

NR:

description
PREDICTED: AF4/FMR2 family member 2-like

GO:

id name namespace
GO:0019825 oxygen binding molecular_function

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU120497 True 349 lncRNA 0.38 1 6120654 6121002

Neighbor

gene id symbol gene type direction distance location
AMCG00015259 NA coding downstream 23636 6084877 ~ 6097018 (-)
AMCG00015260 NA coding downstream 37163 6078223 ~ 6083491 (-)
AMCG00015258 NA coding downstream 112410 5975211 ~ 6008244 (-)
AMCG00015251 NA coding downstream 206717 5900594 ~ 5913937 (-)
AMCG00015247 NA coding downstream 240464 5865044 ~ 5880190 (-)
AMCG00015261 NA coding upstream 3098 6124100 ~ 6144724 (-)
AMCG00015270 dyrk1b,LOC106605641,LOC106578455,LOC107685988,LOC107737818,LOC107666783 coding upstream 309616 6430618 ~ 6440642 (-)
AMCG00015272 fbl,LOC107719117,LOC107666874,LOC102785674,LOC107737817 coding upstream 367440 6488442 ~ 6501219 (-)
AMCG00015273 LOC108437392,LOC105891768,LOC107719116,LOC107737835,LOC108256255,LOC107666762 coding upstream 394364 6515366 ~ 6525807 (-)
AMCG00015275 NA coding upstream 469191 6590193 ~ 6591000 (-)
G96642 NA non-coding downstream 1001 6118621 ~ 6119653 (-)
G96609 NA non-coding downstream 88527 5927459 ~ 6032127 (-)
G96532 NA non-coding downstream 328040 5792403 ~ 5792614 (-)
G96531 NA non-coding downstream 331807 5786397 ~ 5788847 (-)
G96479 NA non-coding downstream 563149 5557251 ~ 5557505 (-)
G96650 NA non-coding upstream 36101 6157103 ~ 6223629 (-)
G96653 NA non-coding upstream 107512 6228514 ~ 6228776 (-)
G96696 NA non-coding upstream 234018 6355020 ~ 6362409 (-)
G96873 NA non-coding upstream 866398 6987400 ~ 7063937 (-)
G96967 NA non-coding upstream 1151909 7272911 ~ 7277373 (-)
AMCG00015257 NA other downstream 48529 6025368 ~ 6072125 (-)
AMCG00015256 NA other downstream 56495 6049477 ~ 6064159 (-)
AMCG00015244 NA other downstream 363545 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 657626 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 1037467 4985572 ~ 5083187 (-)
AMCG00015267 NA other upstream 247752 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 289645 6410647 ~ 6419481 (-)
G96766 NA other upstream 577855 6698857 ~ 6700357 (-)
AMCG00015283 NA other upstream 749460 6870462 ~ 6877734 (-)
AMCG00015285 NA other upstream 770233 6891235 ~ 6896427 (-)

Expression


Co-expression Network