G96696


Basic Information

Item Value
gene id G96696
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 6355020 ~ 6362409 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120566
AAAAAAAGGCCGGTAACAGTCATGGTGGTGGGTTTGGAAAATGTAgtcaaaatatatgcaaaacCTTCAGAGGACATTACTTTGCTGCCTCCAGCCATTTGGATAATTCTTAGTCTGAATCATTATGCAAAGCACTTTTAGAGAATCATTCTCTTCCCATTACAGGTTGATAGTATTACCTGCAGGATGAACACTGCCTAATAATGATCTTGACTCACATCGTTGGACTTTTCCTACTTTTGAGAGgAACAGGAGCAAAGTCCTCCCTGGCTACTCCTGATCATCACTAATTCCAGAAACAACCCCCACTCTGCACACCATCCCTTAAACAATCAGACATTTATATcctgttaattatttattctctcATCTGTTTAGTTGAATGAAGGAGGCCTTGAACAAACAAGGCCACCTGTGTAATTCCAGACAGCTGCGTCCTCTGTACCGTtgagaacaaagaaaacacctGCCTCATTGAAGGACAGTTTGCCAGGAAAATATATCCGCTCGGTCGCAGTCTGTCGGTTAGAGCTTTAAATGTCCTGAGAGCCATCAGGTGGCTGATGATTAGACCTGCTGTAACAAACTGTGCCCCTTGGAAAAAATGGTGACCCCTTCCTTATTGAGAGCAAATACACACCAGAGTCACAAAAGTGGGTGTGTATGCAGAGGGGGACACCCTAGCAGTAAAAGTTTGGTCATTTTTGGATTTACAGGGGGGGTCACACATTTTTCCAGTGGCTGTAAGAAATTGTGCCCCTTGGAAAAAATAGTGACTTCTTCCTTAGTGACAGAAAATACACACTAGTCACAAAAGTGGTTGAGTGTGCACACAGATAGCAAATAATTGACcattataatttcctttaaagttcaaagtttctgttattgcttcacctgtgtgtgtgatagttgtgaaaagctgtcaggaattaaattacttacaaataaataagtaaataaacatttagaagaTTGTACTGCATTTATGTTGCTGAAGTGTATGATGTCTGCATACGTTTACAAGTGGTATTACTTGTGTAGTAAGAAGAAATGAATATAAACAAGAGTCTCAATGCGTttgtctgtgaaaaataaacGTACATcgtacaatacatacataattaccTACATGAATCCCTTGTGTTacttacacaaaataatatgttaCAGTAAGAGCAGATCAAATACAGAATAACTTCAGTACTAAGAAGTGCAACTTTAACTATGTATATAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120566 True 1239 lncRNA 0.38 2 6355020 6362409

Neighbor

gene id symbol gene type direction distance location
AMCG00015261 NA coding downstream 210296 6124100 ~ 6144724 (-)
AMCG00015259 NA coding downstream 258002 6084877 ~ 6097018 (-)
AMCG00015260 NA coding downstream 271529 6078223 ~ 6083491 (-)
AMCG00015258 NA coding downstream 346776 5975211 ~ 6008244 (-)
AMCG00015251 NA coding downstream 441083 5900594 ~ 5913937 (-)
AMCG00015270 dyrk1b,LOC106605641,LOC106578455,LOC107685988,LOC107737818,LOC107666783 coding upstream 68209 6430618 ~ 6440642 (-)
AMCG00015272 fbl,LOC107719117,LOC107666874,LOC102785674,LOC107737817 coding upstream 126033 6488442 ~ 6501219 (-)
AMCG00015273 LOC108437392,LOC105891768,LOC107719116,LOC107737835,LOC108256255,LOC107666762 coding upstream 152957 6515366 ~ 6525807 (-)
AMCG00015275 NA coding upstream 227784 6590193 ~ 6591000 (-)
AMCG00015274 NA coding upstream 245640 6608049 ~ 6609427 (-)
G96653 NA non-coding downstream 126244 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 131391 6157103 ~ 6223629 (-)
G96643 NA non-coding downstream 234018 6120654 ~ 6121002 (-)
G96642 NA non-coding downstream 235367 6118621 ~ 6119653 (-)
G96609 NA non-coding downstream 322893 5927459 ~ 6032127 (-)
G96873 NA non-coding upstream 624991 6987400 ~ 7063937 (-)
G96967 NA non-coding upstream 910502 7272911 ~ 7277373 (-)
G96984 NA non-coding upstream 973606 7336015 ~ 7337227 (-)
G96988 NA non-coding upstream 988100 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 999976 7362385 ~ 7364999 (-)
AMCG00015257 NA other downstream 282895 6025368 ~ 6072125 (-)
AMCG00015256 NA other downstream 290861 6049477 ~ 6064159 (-)
AMCG00015244 NA other downstream 597911 5753593 ~ 5757109 (-)
AMCG00015230 NA other downstream 891992 5394386 ~ 5463028 (-)
AMCG00015211 NA other downstream 1271833 4985572 ~ 5083187 (-)
AMCG00015267 NA other upstream 6345 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 48238 6410647 ~ 6419481 (-)
G96766 NA other upstream 336448 6698857 ~ 6700357 (-)
AMCG00015283 NA other upstream 508053 6870462 ~ 6877734 (-)
AMCG00015285 NA other upstream 528826 6891235 ~ 6896427 (-)

Expression


Co-expression Network