G96936


Basic Information

Item Value
gene id G96936
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7216640 ~ 7225338 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120877
TCCGGATATAATAAACTCCAGCTGACGTTGCCTACTGACAATTAAACTGAGGGGggaggtggtgtgtgtgtggaattaaCTTTTCGATGTTGTTTCTGTCCCTTGAATGTAACTGATCAGTCTTacagaaacagagaaaaatGACAATCAGTGCACCctatctttaaaacaaaacaaaaaacaccaaaaagtTCACTCAGTCATACTGGCTCCAAATCAACATCCCTGTGTGTCTTCCCTTCTGTGTTGCGGTTTGCTGTGGCTGTACTGTGGCTTCCCTACAGTTGTAACAATTCCTCATTGTGCTTTTCCACACACTACCATGCATAGACCAGGGTTTATCAGCACATACAGGTCTTAGAAACACTTAAATTCGTGGGGCATCGTGGTATTCCCAAGGGCCAGCGAAGGACGTCCAAGCCGTGCCCATACGAAGCCACTGTAAGAATCGTGCTACAGCTGCAGCAAAGACATGTTAAAATGAACCAGTCCTGTATGAAATCAGCCTACAAACTGGTATGCTGCATAGGAGGAGATACGCCGTGTTGTTTATgagaaacacactgaaaatgaCTATGGAAGTACTGGAGGCAGTCACGCTGGTTTATGCTTGGAGGGGCACAGGTACACagccgggggggtgggttcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120877 True 650 lncRNA 0.46 2 7216640 7225338

Neighbor

gene id symbol gene type direction distance location
AMCG00015298 NA coding upstream 38810 7175335 ~ 7177830 (+)
AMCG00015290 NA coding upstream 137169 7061902 ~ 7079471 (+)
AMCG00015292 NA coding upstream 175459 7033028 ~ 7041181 (+)
AMCG00015291 NA coding upstream 191594 7017496 ~ 7025046 (+)
AMCG00015289 LOC101167647,LOC102779956,LOC107379074 coding upstream 219886 6991103 ~ 6996754 (+)
AMCG00015297 NA coding downstream 34204 7259542 ~ 7273255 (+)
AMCG00015302 NA coding downstream 157889 7383227 ~ 7386810 (+)
AMCG00015306 NA coding downstream 237217 7462555 ~ 7473836 (+)
AMCG00015309 NA coding downstream 279193 7504531 ~ 7558297 (+)
AMCG00015307 NA coding downstream 335286 7560624 ~ 7564400 (+)
G96915 NA non-coding upstream 70436 7145951 ~ 7146204 (+)
G96837 NA non-coding upstream 294999 6917806 ~ 6921641 (+)
G96767 NA non-coding upstream 513546 6701612 ~ 6703094 (+)
G96716 NA non-coding upstream 726117 6455832 ~ 6490523 (+)
G96710 NA non-coding upstream 785405 6429589 ~ 6431235 (+)
G96992 NA non-coding downstream 139045 7364383 ~ 7364984 (+)
G97059 NA non-coding downstream 408043 7633381 ~ 7649307 (+)
G97071 NA non-coding downstream 428786 7654124 ~ 7654649 (+)
G97072 NA non-coding downstream 431638 7656976 ~ 7657282 (+)
G97118 NA non-coding downstream 547451 7772789 ~ 7773054 (+)
AMCG00015293 NA other upstream 135852 6997597 ~ 7080788 (+)
AMCG00015277 NA other upstream 524841 6686351 ~ 6691799 (+)
G96420 NA other upstream 1751206 5426879 ~ 5465434 (+)
G96415 NA other upstream 1824917 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 2097239 5084574 ~ 5119401 (+)
G97006 NA other downstream 190031 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 720870 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 848843 8074181 ~ 8078832 (+)
AMCG00015343 gng3,LOC107559409 other downstream 898968 8124306 ~ 8126457 (+)
AMCG00015335 NA other downstream 922007 8147345 ~ 8149159 (+)

Expression


Co-expression Network