G96984


Basic Information

Item Value
gene id G96984
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7336015 ~ 7337227 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120933
caggaagtgatcatcttgggctacatacaggaagtcatttgcagatatctctaaatgatttgtagGTCCAGATTTCTACTGATCACGTTAAAAAGAGGCTTATTTTATTCAAACTTACTCAGCATATATTTTCTCCAACAGCCGGAAACGGGCATCACATGGAGGAGCAGCGTTTCCTAACCGCGTACCCTACACATAGTGGATGCACGCCACCGATACACCGCGAATCGCCGGTGGAGGTGAAGAAGCCCTTCGCGGAAAAGCACGGCGCTTGAACGAACACATAGCCCTCTGCACTGTAACACATCCAACGAGAACTGATCCCATGACAGAAAAACGGGCAGTGCAGAACACTTTCAGGACATGCACCGAATACAGGACAAATGAATGCAAATACAGACAGAAAACGAATACAGGTCGCTAATATTCAAACGCCGACAACAGTGACAAttttaagtaatacatttaagcaACTTACTGCCGActgccatttttttaaagttttccaACAGCGACTTCACTTTCCACAGGTTGGGCTGTATGCACTGATGAGGGCTCGGGGCCGTTGTGCTCAAATGCTTCCTGATCGTGGCATTCACTGAACTGTGAGGCGCCTCATATGTAACCCCTCCCTTTCCCTGTGTTATTTCAgcttgtgcatgtgtttttattaagacTGGTCTTGATGTCTTTTAACTATTTCATATATCACTTACTTAATAAATGCAACAGGAGTTCAGACTAGATTGAAGAGGCTCTGCTTAgttttacaaataaaagtgC

Function

GO: NA

KEGG:

id description
ko03018 RNA degradation

RNA

RNA id representative length rna type GC content exon number start site end site
TU120933 True 783 lncRNA 0.44 2 7336015 7337227

Neighbor

gene id symbol gene type direction distance location
AMCG00015303 NA coding downstream 38430 7294862 ~ 7297585 (-)
AMCG00015300 NA coding downstream 104079 7231442 ~ 7231936 (-)
AMCG00015299 psmc4,prs6b,LOC107719110,LOC106605234 coding downstream 112070 7217276 ~ 7223945 (-)
AMCG00015301 NA coding downstream 122638 7127305 ~ 7213377 (-)
AMCG00015296 NA coding downstream 236007 7085696 ~ 7100008 (-)
AMCG00015304 NA coding upstream 49632 7386859 ~ 7389560 (-)
AMCG00015313 NA coding upstream 370683 7707910 ~ 7710268 (-)
AMCG00015314 NA coding upstream 411115 7748342 ~ 7757219 (-)
AMCG00015320 LOC107707189 coding upstream 483967 7821194 ~ 7825760 (-)
AMCG00015321 mrps12 coding upstream 489454 7826681 ~ 7828114 (-)
G96967 NA non-coding downstream 58642 7272911 ~ 7277373 (-)
G96873 NA non-coding downstream 272078 6987400 ~ 7063937 (-)
G96696 NA non-coding downstream 973606 6355020 ~ 6362409 (-)
G96653 NA non-coding downstream 1107239 6228514 ~ 6228776 (-)
G96650 NA non-coding downstream 1112386 6157103 ~ 6223629 (-)
G96988 NA non-coding upstream 13282 7350509 ~ 7350785 (-)
G96994 NA non-coding upstream 25158 7362385 ~ 7364999 (-)
G97041 NA non-coding upstream 160715 7497942 ~ 7619517 (-)
G97121 NA non-coding upstream 443165 7780392 ~ 7780598 (-)
G97130 NA non-coding upstream 477667 7814894 ~ 7815402 (-)
AMCG00015288 NA other downstream 412301 6917679 ~ 6923714 (-)
AMCG00015285 NA other downstream 439588 6891235 ~ 6896427 (-)
AMCG00015283 NA other downstream 458281 6870462 ~ 6877734 (-)
G96766 NA other downstream 635658 6698857 ~ 6700357 (-)
AMCG00015271 NA other downstream 916534 6410647 ~ 6419481 (-)
AMCG00015305 NA other upstream 53662 7390889 ~ 7448294 (-)
G97125 NA other upstream 448860 7786087 ~ 7786442 (-)
AMCG00015333 nxf1,LOC105897453,LOC108417053,LOC106603139 other upstream 732808 8070035 ~ 8091826 (-)
G97411 NA other upstream 794080 8131307 ~ 8134115 (-)
AMCG00015348 ehd1b,LOC107718765,LOC107720605,LOC106603140,LOC107548869,LOC106930329,LOC103471421,LOC103136898 other upstream 885972 8223199 ~ 8283629 (-)

Expression


Co-expression Network