G96992


Basic Information

Item Value
gene id G96992
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7364383 ~ 7364984 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120942
acacacacacacactctgtaaaaCTGACATATTGATGTAGTattgtctgtctccctcccaGCCCTGGCTCCCCATTGCCTACCGCTTCAGCTGCAGGTGTTGCACTGACTTTGCTTGTGTTAGACTCACAATCGTTGTTGGCTCTGCTGTCGCTGTCTCCGTCTTGTGCTACAAATGTCGTTTGAACCATGGACCAGGCTGCGCCATCCTCTTTCTTATGGACtatgaagaactgcatttctttccctgtgtgtttgtgtgaacaaggtcactgcCTCACTGTCTCACTATgctactgtactgtgctatagtcCAACCCTGATatctagaagaacagggtctgataagaaccagttttcaccagcaatctGGGCTTggtacatcgtacaaaccccccttatattaaacattacatatgcttttattttccctgGTTTAGCAATATATGGGTTTCCCTAatgagttgtcaggcagaaaccaaatTTCCACTCATgctgggacagacatgtgggcctggtCACCATAAAAGTGCCTTTACTTTGTATGttttctaagactgttcttgaaaTCGCCTTTCAAACCTCTTccatgcagctgcttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120942 True 602 lncRNA 0.45 1 7364383 7364984

Neighbor

gene id symbol gene type direction distance location
AMCG00015297 NA coding upstream 91128 7259542 ~ 7273255 (+)
AMCG00015298 NA coding upstream 186553 7175335 ~ 7177830 (+)
AMCG00015290 NA coding upstream 284912 7061902 ~ 7079471 (+)
AMCG00015292 NA coding upstream 323202 7033028 ~ 7041181 (+)
AMCG00015291 NA coding upstream 339337 7017496 ~ 7025046 (+)
AMCG00015302 NA coding downstream 18243 7383227 ~ 7386810 (+)
AMCG00015306 NA coding downstream 97571 7462555 ~ 7473836 (+)
AMCG00015309 NA coding downstream 139547 7504531 ~ 7558297 (+)
AMCG00015307 NA coding downstream 195640 7560624 ~ 7564400 (+)
AMCG00015308 NA coding downstream 217068 7582052 ~ 7587325 (+)
G96936 NA non-coding upstream 139045 7216640 ~ 7225338 (+)
G96915 NA non-coding upstream 218179 7145951 ~ 7146204 (+)
G96837 NA non-coding upstream 442742 6917806 ~ 6921641 (+)
G96767 NA non-coding upstream 661289 6701612 ~ 6703094 (+)
G96716 NA non-coding upstream 873860 6455832 ~ 6490523 (+)
G97059 NA non-coding downstream 268397 7633381 ~ 7649307 (+)
G97071 NA non-coding downstream 289140 7654124 ~ 7654649 (+)
G97072 NA non-coding downstream 291992 7656976 ~ 7657282 (+)
G97118 NA non-coding downstream 407805 7772789 ~ 7773054 (+)
G97120 NA non-coding downstream 408289 7773273 ~ 7773477 (+)
AMCG00015293 NA other upstream 283595 6997597 ~ 7080788 (+)
AMCG00015277 NA other upstream 672584 6686351 ~ 6691799 (+)
G96420 NA other upstream 1898949 5426879 ~ 5465434 (+)
G96415 NA other upstream 1972660 5388937 ~ 5391723 (+)
AMCG00015215 NA other upstream 2244982 5084574 ~ 5119401 (+)
G97006 NA other downstream 50385 7415369 ~ 7415762 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 581224 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 709197 8074181 ~ 8078832 (+)
AMCG00015343 gng3,LOC107559409 other downstream 759322 8124306 ~ 8126457 (+)
AMCG00015335 NA other downstream 782361 8147345 ~ 8149159 (+)

Expression


Co-expression Network