G97059


Basic Information

Item Value
gene id G97059
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 7633381 ~ 7649307 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121030
CGACTGTAAAATTATGGAtgacatttatattatacattgttaaattgttttatcatacagtggctctcaaaactcaacccccttggacttttccccATTCCATTGTGTtgcaacatgaaatcagaatggatttaaatgggagtttttgccactgatcaacacagaaaatgtccatgatgtgaaagtgaaaaaatatatactctacaaattgttctaaactattacaaatataaatcagaaAACCACAAGTGCCCttcccttcagtcaatatttggtagaggcacctttggaaGCAGTAATAGCCTATAAGTCCCTACCACCCTtcgcacatctggacacagcaatatTGTCCCATTCTTTGCAAAATTACTCAAGCTCAATCACGTTGGAAAGGGACCTTttgtgaacagcaattttcaactctttccacatattctcaatttgattgaggtccgggctttgactgggctaCTCCAGGACATCAACCTTCTTGTTTTTGAGTCACTCCTGTGTGGCTTTGACtttatgtttggggtcattgtcctgctggaaggtaaATCGTCTCCCAATGATTTCTCTGTACTCTGCTGTATctattttgccctctatctttacaaggtttccaggccctgatgcagagaatcttcctccacttggtctcagagtctcccacatgccttttgtcAAACTCTAGCCAAGATgagatgtgattttttttttctcccataaaggccacttttgtgaagcagtctgcacagtgtctcccagctcagctataggcctcttggtggttTCTCTAACTACTGCCCTTCTCGCcaggatactcagtttttgaggatggtCTGATCTAttcagattcacagttgtgccatattctctccattaattaataatggactttactgtgcggGGTGAGATATTCAATATCTtagaaatgttcttatatcctaaccctgattggtgcttttgaagaaccttattctggatttgatttgaatgatccttcatcttcatgatgtagtttttgttaggaattgtactaaccgaCTGTggaacctcccagagacagatgcatttaacctgaaatcatgtgacacaccttaattgcacagaggtggactccattcaacgaattacatgacttctaaagacaattggtttcatcACATAGCAAAGGGgctgattacttatgcattcaattattttctgttttgtatttgtaattaatttagaaaaatgtgcag

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
TU121030 True 1244 lncRNA 0.39 4 7633381 7649307

Neighbor

gene id symbol gene type direction distance location
AMCG00015308 NA coding upstream 46056 7582052 ~ 7587325 (+)
AMCG00015307 NA coding upstream 68981 7560624 ~ 7564400 (+)
AMCG00015309 NA coding upstream 75084 7504531 ~ 7558297 (+)
AMCG00015306 NA coding upstream 159545 7462555 ~ 7473836 (+)
AMCG00015302 NA coding upstream 246571 7383227 ~ 7386810 (+)
AMCG00015311 NA coding downstream 49540 7698847 ~ 7708047 (+)
AMCG00015315 NA coding downstream 83102 7732409 ~ 7733197 (+)
AMCG00015310 NA coding downstream 86036 7735343 ~ 7750584 (+)
AMCG00015312 NA coding downstream 109764 7759071 ~ 7768474 (+)
AMCG00015317 NA coding downstream 135226 7784533 ~ 7794955 (+)
G96992 NA non-coding upstream 268397 7364383 ~ 7364984 (+)
G96936 NA non-coding upstream 408043 7216640 ~ 7225338 (+)
G96915 NA non-coding upstream 487177 7145951 ~ 7146204 (+)
G96837 NA non-coding upstream 711740 6917806 ~ 6921641 (+)
G96767 NA non-coding upstream 930287 6701612 ~ 6703094 (+)
G97071 NA non-coding downstream 4817 7654124 ~ 7654649 (+)
G97072 NA non-coding downstream 7669 7656976 ~ 7657282 (+)
G97118 NA non-coding downstream 123482 7772789 ~ 7773054 (+)
G97120 NA non-coding downstream 123966 7773273 ~ 7773477 (+)
G97133 NA non-coding downstream 170368 7819675 ~ 7820187 (+)
G97006 NA other upstream 217619 7415369 ~ 7415762 (+)
AMCG00015293 NA other upstream 552593 6997597 ~ 7080788 (+)
AMCG00015277 NA other upstream 941582 6686351 ~ 6691799 (+)
G96420 NA other upstream 2167947 5426879 ~ 5465434 (+)
G96415 NA other upstream 2241658 5388937 ~ 5391723 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other downstream 296901 7946208 ~ 7956114 (+)
AMCG00015334 NA other downstream 424874 8074181 ~ 8078832 (+)
AMCG00015343 gng3,LOC107559409 other downstream 474999 8124306 ~ 8126457 (+)
AMCG00015335 NA other downstream 498038 8147345 ~ 8149159 (+)
AMCG00015345 NA other downstream 547765 8197072 ~ 8201857 (+)

Expression


Co-expression Network