G97293


Basic Information

Item Value
gene id G97293
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8126775 ~ 8128889 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121301
TTTCCATGAACACACTGGCTTTAATTCAGAGGTGGTAGTACAAGAAAGAGCTGGCCCCCCAACATGCACACATGGTCTGTCTGTTGCAGTGTATTCCTGCTTTGTCACTGCATTTCCAATTattatatagacacacatacagaaatcCCTCACCAACTGCCAGCAGTGAAATTCATACATCAACGGTTTTACTTTTGTGTACCAATTTGCCAACCATAGCAGATCTGTGTATACAGTTTTACACGGTAACGCATCACACAGCTAGCCTCTCCCCCTCCAAAGATCCTCTCTGGCTGCGTCTCCCGTACTGGTCACGGTCGTGTGCCCATGCAGTCTCGTTTGCTCCGGGTCCACTGGGCGTAATTGTGATTTTGTAGtagtatttgtgtttaaatcatAGCCCCTAAACATTCAAtgactaaataaaacattacttaTCACTGTATTGCTTTGCACATGTTACATTACCCAGTATGTTACAGTATTGCATGATTTTAATGTTACAGTGTTATTAATTTGTGAATAGTGGAGGAAAATGCAGCTTCCGGCTTCGAGAAATGCATCCGCGGCCATGGGGAACCTAAACCCCTTTTCCCATGAGCTCTAGCGTTTACAGACCACGGGGGTTTTCAAGAACGTGACCCATAAACAGGTGGAGAGGGATTACTGTACATACATCagacacaaatacagaaatataatgtTCATCTGTCAGAGCAGATGCTGTCCCCAGCTCAGGCAGGGACTACTCTCCTTGCATCGGTGTgtgacataataaaaaaaaaattaaaatctgccCTGAAGAGACCACCCTCAACAAGTGCGCTAATTAGGTAAGCGAGTTAACTGGCATCCAGGCGTGTCTGTGTCACCTaggtgtgtgcgtttgtgtagTCCTAGTGCGTTGGTGCtctacacacatgcacatgcaaaGACACTCTCATAAATCGCTATCCttgacactcactcacacacactctctccctctcatttgGAAATTGCTGGTGTTTTGAAGCtgtttctctcccctctcctctctcccctctcctcagGTCAGGTCGGTTCAGCACAGCTTGATCATGCACTCCCTGGCCTTCCCCACGCCGACCCACTTCACTGTAGGACACATGgacacagtcagacagacacatggacacacagtTAGAGAgacttaaacacacacacacaccattggggggggggatctcTCACCTGGCACCTGCAAGTAGTCCTCGATGAAGTGCACATATCTCTGTGCAGCAGGAGGCAGGTCGGCAAAGCAGCCCGCCCCCCCGGTGCTACACTGCCAACCAGGCAGGACAGCGTAGCGCACTGACACTCGAGACAGCAGGTCCACACTCGCTAGAGAGGGGCGAGAGGAGATGATTAAAACAGGCACTGTCTGACTGAGACTGgacaatattgtatattaacactgcacacacagagagagagagcacaagtgtgtgtgtgttaatgtgtgacTGTGAATTTGCGCTGTGAGGGACACTCACCAGGGAAGCTGGGGATCTCCTCCCCATCAATCTCATAGGCCACGCCCACTTTGATCTCCTCCAGCGTATCCAGAATGTCCAGCTTGGTCAGAGCGAggctggaggagggggggggcgATTGAGTTTAACTCTGATTGACcgacacattgacacacagactgactgactgatacactgaaagcattcttacgcGGTGAAGCCGTTGATCATGTGAGCGTATTTAACCAGCACCAGGTCTAGCCAGCCACAGCGGCGCCGCCGGCCCGTCGTCACGCCCACCTCACTGCCCCGGGACTGCAGCAGAGACCCCAGCTCCTGTGTCCTGTTCTGTGGGGAAGGCGCCGACGCCCACACGTGTGCTGTAGGCCTTCACCACGCCGTACACGCAGCCCACGTGACGCGGGGAAATGCCCAGACCCGTGCACACCCCGCCCACAGTGCAGTTGGAGCTCGTCACGAATGGGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121301 True 1981 lncRNA 0.51 2 8126775 8128889

Neighbor

gene id symbol gene type direction distance location
AMCG00015325 LOC106603145 coding upstream 156092 7964647 ~ 7970683 (+)
AMCG00015323 ccdc85b,LOC102791751 coding upstream 225055 7901121 ~ 7901720 (+)
AMCG00015316 NA coding upstream 277772 7845592 ~ 7849003 (+)
AMCG00015322 NA coding upstream 291612 7830597 ~ 7835163 (+)
AMCG00015317 NA coding upstream 331820 7784533 ~ 7794955 (+)
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding downstream 86126 8215015 ~ 8224773 (+)
AMCG00015346 NA coding downstream 130284 8259173 ~ 8264168 (+)
AMCG00015357 NA coding downstream 243577 8372466 ~ 8381177 (+)
AMCG00015364 NA coding downstream 304594 8433483 ~ 8443894 (+)
AMCG00015369 sart1,LOC107568296 coding downstream 385824 8514713 ~ 8524559 (+)
G97284 NA non-coding upstream 10223 8114916 ~ 8116552 (+)
G97271 NA non-coding upstream 25010 8091095 ~ 8101765 (+)
G97206 NA non-coding upstream 71948 8051523 ~ 8054827 (+)
G97184 NA non-coding upstream 164687 7958655 ~ 7962088 (+)
G97172 NA non-coding upstream 195753 7920405 ~ 7931022 (+)
G97347 NA non-coding downstream 113888 8242777 ~ 8244987 (+)
G97350 NA non-coding downstream 119222 8248111 ~ 8250285 (+)
G97383 NA non-coding downstream 348333 8477222 ~ 8480537 (+)
G97543 NA non-coding downstream 484366 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 495200 8624089 ~ 8624687 (+)
AMCG00015343 gng3,LOC107559409 other upstream 318 8124306 ~ 8126457 (+)
AMCG00015334 NA other upstream 47943 8074181 ~ 8078832 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other upstream 170661 7946208 ~ 7956114 (+)
G97006 NA other upstream 711013 7415369 ~ 7415762 (+)
AMCG00015293 NA other upstream 1045987 6997597 ~ 7080788 (+)
AMCG00015335 NA other downstream 18456 8147345 ~ 8149159 (+)
AMCG00015345 NA other downstream 68183 8197072 ~ 8201857 (+)
G97343 NA other downstream 104535 8233424 ~ 8294330 (+)
AMCG00015356 NA other downstream 160081 8288970 ~ 8293681 (+)
AMCG00015358 NA other downstream 166198 8295087 ~ 8303048 (+)

Expression


Co-expression Network