G97343


Basic Information

Item Value
gene id G97343
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8233424 ~ 8294330 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121352
cacctgtatgAGCAGGTCGAGCTCGAATGGGTTGACGCAGGTGTGGTTGCCCAGGAAGTCGCTCTTGGCCTGGATCACGTGGCTGTGCGTCTGCGTCTCTCGCGGCGCCTCCAGCGTGCGGAATACCACGGCGCCCAGCACCAGGTACAGCAGGACGGCGGCCAGGATGGCCAGCAGCGTAGAGCACCGCATCCCGGCTAAAGCCCCGCCTCCTCCGCCCTCCTGCTCCCTGCGCTCTACGGCACTCcgcctcctctcctcctcctccgcctctttgttcttcttcctccctcctcctcctccacctcttcctcctcttctgctTAGAATGGAATCCCGGGAGCCGTAGCTGGGCAACAGTCGCTCGGGGAGACGGTCAAATtcgtcgtcctcctcctcctcctcctccctcctgtcTAGAATGCAATGGACACTAGTTATTATACACAGTGCTGGGTGCGTACCTTGGGGACAGCTCCACTCGCACCTGGCTCTGCCTCAGTCCCCTGCAGGGGGCGCAGTGGAGCAGTACTGATGCCTCCGGGTCCATGGCTCACCTCTGCTTCTTTCGCCAATACCCTTCTTCTCtgtccacccctctctctctctctctgctggtgGGAGGTGAGAGAGGGTCCGGGTCACAGGTGCCATCTGAACAGGTGTCAGAGGGCAGCTGTGACCTCAAGGGGCCTGTCGATTCACCAGGGGGGGTCCAGGCTGGTCTTCTAGCACAGAGACAGAAGTGCTGTGAATTGCACCCAGTCCTGTAATGCTGAATCAGGACTTAGTGCAGAGTTTCTCCAGGCAGTGGAGGTTAAAACTGTTGCGCtccaaagaaaagaaaagatgttGAGTAATTTCTGCCCGCCCTGGTGCTTAATTTCTGTCAGATGGCCTCCTCTGAGACTGAGAGGGAGACTGATGATACATCATCACAGTAATGTAGACCAGCCTCACTCGCTCCATTACAGCACagtgatgtgtgtgtaaatgtgagTGATTTagtgtgatttgtgtgtgtgagagagtgagattgtgtgtgtaaatgtgagtgtgattgtgtgtgtgtatgagacagtgtgagagtgagaTTGTGTGTGAATGATTGTGTGTGAGATTTTGTGTCGGAGAGGGAAGGAAGTTGCGCCCTCTAGTGACTGACTGATAAATCTAGCTAATTCTGTGTTGGGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121352 True 1197 TUCP 0.55 3 8233424 8294330

Neighbor

gene id symbol gene type direction distance location
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding upstream 8651 8215015 ~ 8224773 (+)
AMCG00015325 LOC106603145 coding upstream 262741 7964647 ~ 7970683 (+)
AMCG00015323 ccdc85b,LOC102791751 coding upstream 331704 7901121 ~ 7901720 (+)
AMCG00015316 NA coding upstream 384421 7845592 ~ 7849003 (+)
AMCG00015322 NA coding upstream 398261 7830597 ~ 7835163 (+)
AMCG00015357 NA coding downstream 78136 8372466 ~ 8381177 (+)
AMCG00015364 NA coding downstream 139153 8433483 ~ 8443894 (+)
AMCG00015369 sart1,LOC107568296 coding downstream 220383 8514713 ~ 8524559 (+)
AMCG00015370 LOC102776143 coding downstream 258468 8552798 ~ 8572065 (+)
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding downstream 297586 8591916 ~ 8596613 (+)
G97265 cfl1,LOC105028071,LOC106604708,LOC106611761 non-coding upstream 60413 8096386 ~ 8173011 (+)
G97293 NA non-coding upstream 104535 8126775 ~ 8128889 (+)
G97284 NA non-coding upstream 116872 8114916 ~ 8116552 (+)
G97271 NA non-coding upstream 131659 8091095 ~ 8101765 (+)
G97206 NA non-coding upstream 178597 8051523 ~ 8054827 (+)
G97383 NA non-coding downstream 182892 8477222 ~ 8480537 (+)
G97543 NA non-coding downstream 318925 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 329759 8624089 ~ 8624687 (+)
G97560 NA non-coding downstream 398098 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 424911 8719241 ~ 8719562 (+)
AMCG00015345 NA other upstream 31567 8197072 ~ 8201857 (+)
AMCG00015335 NA other upstream 84265 8147345 ~ 8149159 (+)
AMCG00015343 gng3,LOC107559409 other upstream 106967 8124306 ~ 8126457 (+)
AMCG00015334 NA other upstream 154592 8074181 ~ 8078832 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other upstream 277310 7946208 ~ 7956114 (+)
AMCG00015358 NA other downstream 757 8295087 ~ 8303048 (+)
AMCG00015362 NA other downstream 9055 8303385 ~ 8305677 (+)
AMCG00015359 NA other downstream 13250 8307580 ~ 8312199 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other downstream 48163 8342493 ~ 8433092 (+)
AMCG00015363 NA other downstream 88339 8382669 ~ 8411881 (+)

Expression


Co-expression Network