G97347


Basic Information

Item Value
gene id G97347
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8242777 ~ 8244987 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121356
CATCTTGGACTGGAAAGcttcaaacacaaaaatgaaccCCGATCTGAGCCCAgtgagtaataaaataaaaacattcacagCTTGGATACATTGCATAACTCCCCCACTCCCCCTCCCCAGACTGGAGCACAAACAACATCATGTACCAACAGAACAGGATGAACAGGACGGACTGAAACGCAGGGctgtggagagaaaaaacaaccagAAAACGAAACCAATAAGCTAAACAGAAGCACGGTTTGGGAACAGGCCTACGTGTGTTCAGAGTGTGGAGAGCCGGGAACGTATACAGATTTTGGCAATTCATTACACTGACTTTTACCGACATTGCCGGCCCCAGGGTGGGGGGTTTCTGGTCTCCAGTGCTGGGGGGTGCCTGTTTATTCCAGGTGTGAATCAGTGACTGAATGGAAACCTGTAACCCTGGTATAACCCTACACAGACAtactaccacacacacacatacataaatactcatGCTCTCAGCACAATTAACAGAGATTGGGGAGTTCCTGACTGGACtaagactggactggactgctgtagagtcactgactggactggatgACTCAGAGTGTATCCATGCCTGGCTCAGTCCGTGTGTAACAGCATAGCAGTAGTCCAGACCATAATAGGTGTGGAAAACAAAGGAGAATGGatagaaaggagagagagagagcacacagcCTACATAAACAGCATTGCAGTCTGAGTACAAGGTGCTGCCTGCGGCCCTAGACACAGCTCCTGGCTTCCTGGGACCAGGGAGTTTGAGAAATGAACGATTGTCCATTTTCAGGTTTTCCAAATCTTCCTGATCAGATTGACAGAAAGACACTGCCACACACTCACtcgcagagaggagagagagagacacacagacacagacagacagaaagagactgAAAGCAGAGGCTGAGGGGGGGCTGGGTGCTGGAGAGAAGCCTGTTTCCAGCAGCAGTCAGAGCCCAGCCCTGGCAGGGCAGTAAATTACAGCTGGACAGCTGGTTACACACAGACGACAAGCCCAGAGGCaacgcgcacacacactcacatacacaggcacacactctgtgtatatattcacacacacacagcccattTCCTTATATagctgacacacacagtaaacatatatatatacactctttCTAAATGTCTAAACACTGGaccacacgcacacgcacacgcacacaggctGTGGGAATGAGAGCGTCATATGGCCGTGTGCCCATGTCCTGATGTGTGGTCACAGATACTAATGAGAGTGCAAATGGTAGCGGCCAAGGATCCTTCAAAacctttctctccttctccctttttCAGACTGTCAGTGAGATGAACGGCTTCATACAGAGAATTAAGCTGagtgactttttatttttattctcaaggctgtaaacacacacacagtcatctctcatacacacatacCCCCTACACTCGGCACactaatagtagtagtagtagtagcagtagcagtagtattagTAGATGTTAGTAGTAGTAACATTGCACAGTGTATTCACATTAGACCCACATGTTGTGGCTCAGGTCGGAGTGGAGCTGGAGCAGCCGGTGTGAACAGGGCCCTGTCCCTCCTACTGGAGTCGTACAGTGTGGAGATTGATAAGAAAcctCCTTCTTCGGCAGTATTGGTATGTAGAGTGATCCCGCTCCCcgcatctccctctctctgcctccctctcctcttctccctcaATACCTGTTCAATCAGTGGGTGGGGGCTCCCTGTCCTTGGCCGGGGCAGAGGGGGGCTGGAGGGAGGGCAGCGTGGCCGTCCCCAACAGCCCCCTCCTCAGGACATAGGGGCAGGCAGGGCCGCTGGGGATGTCTGCGAAACCTGGAGGGGGAGGCGACACAGAGAGGGGGCGGTTAATGTTGCAGTTCATTGTAATCGGTCTGGCATGGCTGAGCTTGTTACAGTTATTGTCCCTGCGAGGGAGAGGAAGGTTTAGGATGAATGGAGATGAGTGATGGGAGAGTTTCTCATTGTTTTTCCTTCCAGCTGCAACCTGATGAGGCAAACATGCTGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121356 True 2063 lncRNA 0.50 2 8242777 8244987

Neighbor

gene id symbol gene type direction distance location
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding upstream 18004 8215015 ~ 8224773 (+)
AMCG00015325 LOC106603145 coding upstream 272094 7964647 ~ 7970683 (+)
AMCG00015323 ccdc85b,LOC102791751 coding upstream 341057 7901121 ~ 7901720 (+)
AMCG00015316 NA coding upstream 393774 7845592 ~ 7849003 (+)
AMCG00015322 NA coding upstream 407614 7830597 ~ 7835163 (+)
AMCG00015346 NA coding downstream 14186 8259173 ~ 8264168 (+)
AMCG00015357 NA coding downstream 127479 8372466 ~ 8381177 (+)
AMCG00015364 NA coding downstream 188496 8433483 ~ 8443894 (+)
AMCG00015369 sart1,LOC107568296 coding downstream 269726 8514713 ~ 8524559 (+)
AMCG00015370 LOC102776143 coding downstream 307811 8552798 ~ 8572065 (+)
G97265 cfl1,LOC105028071,LOC106604708,LOC106611761 non-coding upstream 69766 8096386 ~ 8173011 (+)
G97293 NA non-coding upstream 113888 8126775 ~ 8128889 (+)
G97284 NA non-coding upstream 126225 8114916 ~ 8116552 (+)
G97271 NA non-coding upstream 141012 8091095 ~ 8101765 (+)
G97206 NA non-coding upstream 187950 8051523 ~ 8054827 (+)
G97350 NA non-coding downstream 3124 8248111 ~ 8250285 (+)
G97383 NA non-coding downstream 232235 8477222 ~ 8480537 (+)
G97543 NA non-coding downstream 368268 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 379102 8624089 ~ 8624687 (+)
G97560 NA non-coding downstream 447441 8692428 ~ 8692642 (+)
AMCG00015345 NA other upstream 40920 8197072 ~ 8201857 (+)
AMCG00015335 NA other upstream 93618 8147345 ~ 8149159 (+)
AMCG00015343 gng3,LOC107559409 other upstream 116320 8124306 ~ 8126457 (+)
AMCG00015334 NA other upstream 163945 8074181 ~ 8078832 (+)
AMCG00015324 esrra,LOC107669367,LOC107715365,LOC104926321,LOC106534575 other upstream 286663 7946208 ~ 7956114 (+)
AMCG00015356 NA other downstream 43983 8288970 ~ 8293681 (+)
AMCG00015358 NA other downstream 50100 8295087 ~ 8303048 (+)
AMCG00015362 NA other downstream 58398 8303385 ~ 8305677 (+)
AMCG00015359 NA other downstream 62593 8307580 ~ 8312199 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other downstream 97506 8342493 ~ 8433092 (+)

Expression


Co-expression Network