G97383


Basic Information

Item Value
gene id G97383
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8477222 ~ 8480537 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121407
GGGGGGCAGGAAGAAGAGAAACCAAACAGAATAATGTTCACAATATCAAAAGGAAAGAGAAGCCATGTAAATGACAGCACGACCGCCTGGCCACCATCCCCAAGTCTTTCACTGCAACTGGCTCTCCTCACAACTGCAGTGTGccattaaacattacattgtgCAGGATTGGCAAGTCAGATCCTCCACTTCCTTGCGGTTtttgaacagttttattttttgcaggtAGGAGGCGCATACGGACAGTGCGGGAGTGGACATCTTGTCAGGCCTGGGGAAAACAGGTCACGGGTGTCACCCCTTATTCCTACGATGGAAGCACACTATGGAAGCACCCACACAGCCGGCCGCCCACCCGCGCCTGTCCTCTCGAGGTGTGCTGGTGCCCTGGCCACAGCCTGACGCTGCCTTACCCGCTGGCTGCAGTGTGGCAGCCTGTCCCCCTGGACAGCGCACCTCCTGGGCAGTAGCGAGCAGGACTGCATGGTGCCACTCCCCAGCCGGGCGCAGCTCTGGGGGGCTGAGGGTATCAGCCTAAGGCACAGCATAGGACTCTTTTGGGCTACAGATGCAGAAGCAACGACCACTTCCCCATcgtaattttgtcatttttatttatgaattaatctGCAACTCAGAgtggtgttggtgtgtgtgtatgctgggggaggaggaaggagggaggcTAGAGGCAGAGTGCTGAGGCAATGGCAAGTTCTCaaacttccccccccccccccccccatttcttggttttcactttttcttaaaaaattaaataaaaactaaacatgttAAACAAACTGGAGTGTCCAGCCCTAGTACTAAACTCCCGTGGCGCTGGCTGGTGCAAGCTTTGGTCCTTGACCTGATTAACAATACTATCTCTAATGATTataacaaacagcagcagctctgcGTTTAAAAAAAAGCCTGGTTATTTGTAGTTCTACTACCAATACTTCATTTAAATCATCAGCCAGGACTGTAACTAACTGGGCTGTTTCCATTTAGGAAAAATCAATTCAGCCGATCTGCAGACGCGCAGCACTCTCACCGGGGCAGACGGGCCTCCTGGCATAGGGCGGAGCTGGCCTTCCTTCTACCAACCTCCCCCCTGAAGGCCAGCCAACCTCCCACTCAATACCACCCCCTGCAGTGTCCGACTGcagtcacccccccccccacgacGCCACCCAAGCGCCCCTGCATCGCCACCTCCGCTGAACACTGGCGCGAAACACTATGGTGCGCAGGgcggaaaaaaaataataataatNNNNNNNNTGACTGGTCGCTGGTTTGGGTTTTTTAAGCTCGATCTAGTTTTTCAGCCCACTGACTCCAGTTTGGACACCTTTCTCCCCCAGTGAGGGACATGAAACAAAACCAGAGTCAGACTGGGACAGGAAGTCAGCTTTGGGAAGCAGTGTATGCCGGGAGCAGCCGTGTCTGACACATACCAGGAAACGGGAAGTGTACGTTTCAGAACAGGGGAGGGAGAACAGAAaccaaaactaacaaaaacaaattaacatgcaTCTCTCTTGccttaaactttaaaaaatatttagttatggtttgtttttgtacatataGTGATCTTTAAATCTCACAGTCAAGCACTGGTGACAATGGCATGCTTATAGAGACCAAACTAAACTGGAGGGAAAGAAAagttcaaaatcataaaaaaacaaaagcatgtgtGTTGGGGGCAGGGGGGCCTGAATCAAAGCTGGGTCCATACAGGCCAGGGTGCAGGGGTCGGGGTTACAgaacagaatggaaaaaaaaaaaaaaaaaaagtaaagaaaaaggaagctgactggagaggggggggggggggggggggggtagaaaaaaatagaaggggagaaaggaaggaaggggTTGGAAAAAGAAAGTCCATACACTTCTTCACACATGACAATGCCAGGGTCCGTTCGGAGCTGGACATCACTTTGCGGTCATCATCTGTACAAACTCTgcacacagagagggggagggaagagttAATTATGCACCCGATTATTTTCTTGGATGCAAAATCAGTTTGTATCGGTCAGTCAGtttgcagtgtagtacagtgtggATAGTGCAGTGCATCAATGTAGTCTAGTGTGTGTATAGTGCATCAATCTGTACAGTATAGGGTCACTAAAGCGCCAGAGCACTAGTCTTAGTACAGTATAGTGGGTCGATCAGTCCAAGGTGCCCCTCAACACACTGACCTTCGTAGTTGACCTGTCCGTCGCCATCGATGTCGGCTTCTCTGATCATCTCATCCACCTCCTCGTCGGTCAGCTTCTCGCCCAGGTTGGTCATGACGTGGCGCAGCTCAGCTGCACTGATGTAGCCGTTACCGTCCTGAGGACACAGCGCGCGGCAACATCACCACACAGCAAAACTACCGTCACATCCCGATACTAACCTCAACACTACATTCACACATTCCTCAACCCCAAACACTCAACACTACAGCATTAGTTACATCTCCCCCCACACCTTGTCGAAGACTCTGAAGGCCTCTCTGATCTCCTCCTCACTGTCGGTGTCCTTCATCTTCCGCGCCATCATGGTTAGGAACTCAGGGAAGTCAATGGTGCCGTTTCCTGAgaagggtcaaaggtcaagagCTAGTGGGCAAGGGTTAGGAACCAAGCTTCCCAGCATCATACTCTCTCCCTGTGTGCATCTCCTCTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121407 True 2709 lncRNA 0.50 2 8477222 8480537

Neighbor

gene id symbol gene type direction distance location
AMCG00015364 NA coding upstream 33328 8433483 ~ 8443894 (+)
AMCG00015357 NA coding upstream 96045 8372466 ~ 8381177 (+)
AMCG00015346 NA coding upstream 213054 8259173 ~ 8264168 (+)
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding upstream 252449 8215015 ~ 8224773 (+)
AMCG00015325 LOC106603145 coding upstream 506539 7964647 ~ 7970683 (+)
AMCG00015369 sart1,LOC107568296 coding downstream 34176 8514713 ~ 8524559 (+)
AMCG00015370 LOC102776143 coding downstream 72261 8552798 ~ 8572065 (+)
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding downstream 111379 8591916 ~ 8596613 (+)
AMCG00015377 fkbp2,LOC106603154 coding downstream 128313 8608850 ~ 8612864 (+)
AMCG00015376 NA coding downstream 147234 8627771 ~ 8655109 (+)
G97350 NA non-coding upstream 226937 8248111 ~ 8250285 (+)
G97347 NA non-coding upstream 232235 8242777 ~ 8244987 (+)
G97265 cfl1,LOC105028071,LOC106604708,LOC106611761 non-coding upstream 304211 8096386 ~ 8173011 (+)
G97293 NA non-coding upstream 348333 8126775 ~ 8128889 (+)
G97284 NA non-coding upstream 360670 8114916 ~ 8116552 (+)
G97543 NA non-coding downstream 132718 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 143552 8624089 ~ 8624687 (+)
G97560 NA non-coding downstream 211891 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 238704 8719241 ~ 8719562 (+)
G97612 NA non-coding downstream 296680 8777217 ~ 8779046 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other upstream 44130 8342493 ~ 8433092 (+)
AMCG00015363 NA other upstream 65341 8382669 ~ 8411881 (+)
AMCG00015359 NA other upstream 165023 8307580 ~ 8312199 (+)
AMCG00015362 NA other upstream 171545 8303385 ~ 8305677 (+)
AMCG00015358 NA other upstream 174174 8295087 ~ 8303048 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other downstream 48481 8529018 ~ 8533404 (+)
G97513 NA other downstream 62787 8543324 ~ 8544782 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other downstream 206231 8686768 ~ 8687680 (+)
AMCG00015412 NA other downstream 316534 8797071 ~ 9124271 (+)
AMCG00015397 NA other downstream 348199 8828736 ~ 8893016 (+)

Expression


Co-expression Network