G97513


Basic Information

Item Value
gene id G97513
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8543324 ~ 8544782 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121580
TTCGGATTATCAATCACTTATCTGAGATACACTGGaatgtgcgagtgtgtgtgttctttgtTTTCCATGGATATATTTAGACTCTGGGTCCAAAGTCCACTGCTCAGTTCTGTTTGCTGTGGACTGATTGGAAATGagtgttcttgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagctgaccAGAGCAAGGTCATCAAGATCtgataaatattcaaatgtacagttttcaagtgttgatttattacatttatttacacaatagttgatttatttacttatttttacagtatttttacaaGTTTTAGCACAAAACAGTTGAAATGGCACAAAGGATGCAGGTGATTGACAGCTGGACGGGGAGGGCAGGACAATGGCTTCCTGTAGCTCAGCCCCTGTATTCAATCACACCGGTAGGGCGTCAAAGCTAGGAGGCATAAGCGATTGGGTGGACAGGATTATCAAAGAGGCTATAAACAAGTGCCTCTCCattcccctctcctctctcccgctctccctTTCCTCTCTTAGTCAGTTTATCAGTCAGTCATTTCTcgctctctgtgtctctattttgctccctctttccttttctctctctctctccttctccctcccctttTCTCTTCCGGTCTCCATTCCCTTTCTCTGCCCCTTTGTTCTCTCCCCATCTTCCTTCTATCCTTCTCCCCATCAATCTCTCTCTTGTCTCTCCCCATCAATCCAGTTTTGTCCAGTCCCAGTGTAGATCAGTCCAGTCtgttacaatacagtgcagtgtagtataatTCAATACTGTAGAAGGCATTGCAATGCAGTATAGTCCAGTACAACACAGTGCAGCATAGTGTactacaatacagtgcagttaagTATACTACAGAgcactacagtacaatacagtctagcacagtgcagtatagtacagttaaattagggttacagagcaatataataaattaaagtcaCTTTAGAAGAACAGTATAGCTGTATAGTTCCGGGCAGagcactacagtacagtgcaatacagtacagtgcagtaaggtgtagtatagtatagtccACCAGTGCAacatagtacagtgcagtataacaGTGTAATACACTGCAGTATAACAGTGTAATACACTACAGTATAACAGTGTAATAGAGTACACTACATTATAACAATGTAATACCGTCCAATATTACAGTGTACTACAGTCCAGTGCAGTTCAGTCAGGTCAGGTGCGTGTCAGGGTGCTGTGATGACAGGGACTCTATTTGTAGTATCCCAGATTGGAAGAATGCTTCAAAAAGGAGGATTTttgaggagaggaggaggagggggaggaggagggggaggaagagacGGGGGCGAGGGTGATGGTGTGCAGGTTGGTTATGAAGGCCTCCCAGCCTCGGCGAAATGCCCTGTCGaaggc

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU121580 True 1436 TUCP 0.44 2 8543324 8544782

Neighbor

gene id symbol gene type direction distance location
AMCG00015369 sart1,LOC107568296 coding upstream 18765 8514713 ~ 8524559 (+)
AMCG00015364 NA coding upstream 99430 8433483 ~ 8443894 (+)
AMCG00015357 NA coding upstream 162147 8372466 ~ 8381177 (+)
AMCG00015346 NA coding upstream 279156 8259173 ~ 8264168 (+)
AMCG00015344 ehd1b,LOC107720605,LOC107548869,LOC107718765,LOC107701170,LOC107555151 coding upstream 318551 8215015 ~ 8224773 (+)
AMCG00015370 LOC102776143 coding downstream 8016 8552798 ~ 8572065 (+)
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding downstream 47134 8591916 ~ 8596613 (+)
AMCG00015377 fkbp2,LOC106603154 coding downstream 64068 8608850 ~ 8612864 (+)
AMCG00015376 NA coding downstream 82989 8627771 ~ 8655109 (+)
AMCG00015381 NA coding downstream 185192 8729974 ~ 8731761 (+)
G97383 NA non-coding upstream 62787 8477222 ~ 8480537 (+)
G97350 NA non-coding upstream 293039 8248111 ~ 8250285 (+)
G97347 NA non-coding upstream 298337 8242777 ~ 8244987 (+)
G97293 NA non-coding upstream 414435 8126775 ~ 8128889 (+)
G97284 NA non-coding upstream 426772 8114916 ~ 8116552 (+)
G97543 NA non-coding downstream 68473 8613255 ~ 8616320 (+)
G97547 NA non-coding downstream 79307 8624089 ~ 8624687 (+)
G97560 NA non-coding downstream 147646 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 174459 8719241 ~ 8719562 (+)
G97612 NA non-coding downstream 232435 8777217 ~ 8779046 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other upstream 9920 8529018 ~ 8533404 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other upstream 110232 8342493 ~ 8433092 (+)
AMCG00015363 NA other upstream 131443 8382669 ~ 8411881 (+)
AMCG00015359 NA other upstream 231125 8307580 ~ 8312199 (+)
AMCG00015362 NA other upstream 237647 8303385 ~ 8305677 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other downstream 141986 8686768 ~ 8687680 (+)
AMCG00015412 NA other downstream 252289 8797071 ~ 9124271 (+)
AMCG00015397 NA other downstream 283954 8828736 ~ 8893016 (+)
AMCG00015390 NA other downstream 332510 8877292 ~ 8884897 (+)
AMCG00015396 NA other downstream 406954 8951736 ~ 8953684 (+)

Expression


Co-expression Network