G97547


Basic Information

Item Value
gene id G97547
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8624089 ~ 8624687 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121620
cagagtcactgactggactggactggactggtgcagagtcactgactggactggactggactggactgctgcagggtcactgactggactggactggactggactggactgctgcagagtcactgactggactggactggactggactgctgcagagtcactgactggactggactggactgctgcagagtcactgactggactggactggactgctgcagggtcactgactggactggtgcagagtcactgactggactggactggactggactggtgcAGAGTCACTaagtggactggactggactgctgcagagtcactgacttgactggactggactggactgctgcagagtcactgactg
>TU121621
cagagtcactgactggactggactggactggtgcagagtcactgactggactggactggactggactgctgcagggtcactgactggactggactggactggactggactgctgcagagtcactgactggactggactggactggactgctgcagagtcactgactggactggactggactggactggactggtgcagagtcactgactggactggactggactgctgcagagtcactgactggactggactggactggactgctg

Function

GO: NA

KEGG:

id description
ko04072 Phospholipase D signaling pathway
ko05231 Choline metabolism in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
TU121620 True 365 lncRNA 0.58 2 8624089 8624476
TU121621 False 266 lncRNA 0.58 2 8624089 8624687

Neighbor

gene id symbol gene type direction distance location
AMCG00015377 fkbp2,LOC106603154 coding upstream 11225 8608850 ~ 8612864 (+)
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding upstream 27476 8591916 ~ 8596613 (+)
AMCG00015370 LOC102776143 coding upstream 52024 8552798 ~ 8572065 (+)
AMCG00015369 sart1,LOC107568296 coding upstream 99530 8514713 ~ 8524559 (+)
AMCG00015364 NA coding upstream 180195 8433483 ~ 8443894 (+)
AMCG00015376 NA coding downstream 3084 8627771 ~ 8655109 (+)
AMCG00015381 NA coding downstream 105287 8729974 ~ 8731761 (+)
AMCG00015383 NA coding downstream 111274 8735961 ~ 8742485 (+)
AMCG00015382 NA coding downstream 124200 8748887 ~ 8753046 (+)
AMCG00015391 arl2 coding downstream 173546 8798233 ~ 8800278 (+)
G97543 NA non-coding upstream 7769 8613255 ~ 8616320 (+)
G97383 NA non-coding upstream 143552 8477222 ~ 8480537 (+)
G97350 NA non-coding upstream 373804 8248111 ~ 8250285 (+)
G97347 NA non-coding upstream 379102 8242777 ~ 8244987 (+)
G97293 NA non-coding upstream 495200 8126775 ~ 8128889 (+)
G97560 NA non-coding downstream 67741 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 94554 8719241 ~ 8719562 (+)
G97612 NA non-coding downstream 152530 8777217 ~ 8779046 (+)
G97618 NA non-coding downstream 159059 8783746 ~ 8783991 (+)
G97619 NA non-coding downstream 159525 8784212 ~ 8785276 (+)
G97513 NA other upstream 79307 8543324 ~ 8544782 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other upstream 90685 8529018 ~ 8533404 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other upstream 190997 8342493 ~ 8433092 (+)
AMCG00015363 NA other upstream 212208 8382669 ~ 8411881 (+)
AMCG00015359 NA other upstream 311890 8307580 ~ 8312199 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other downstream 62081 8686768 ~ 8687680 (+)
AMCG00015412 NA other downstream 172384 8797071 ~ 9124271 (+)
AMCG00015397 NA other downstream 204049 8828736 ~ 8893016 (+)
AMCG00015390 NA other downstream 252605 8877292 ~ 8884897 (+)
AMCG00015396 NA other downstream 327049 8951736 ~ 8953684 (+)

Expression


Co-expression Network