G97558 (LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532)


Basic Information

Item Value
gene id G97558
gene name LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8686768 ~ 8687680 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121633
CTGGCTGGCCGTCCATCTCGATATCCAACTTGGCGAAGGGCCCGTCCCCGCCTTCTGTCTCCACGATGATGCCACGATGCTTGTCCACCCGGTAACGCTTGCGCACGTACTTGTAGAAGAGCAGGCGCCGGTCGGCCACCCAGGCCTGCAGCACGCATagggggaagaagaagaaggtgaGCACCGCCTCCCACACCTCCACCACGCCTGGGGAGGACACGGATAGGATGATGTAGAGCCACACGTAGGCGAAGATGCTCCAGGCGGCTGTGACAAAGAACACACGCAGGTGTTTGATCTTGCGTGTCTCGCCGTCAGGCACCACGTAGACGCAGATGGCGATGATGACGAACATGTTGAAGGCGGCGCTGCCCACGATGGTGGAGGGCCCCAGGTCGCCGGCCTCAAACTGGTGCCCGCACACCTCGATCACAGACAGCAGGATCTCGGGGGCAGAGGAGCCCAGCGCCATGAGGGTGAGGTTGGAGACCGTCTCGTTCCAGATGCGcacggtggtggtggtggtctcGCCATTGGGCTTCTTGACCGTGATCTCCTTCTCCTGCGAGGTGATGACCTCGATGGAGGACATGAACCGGTCAGCGATGATGGACATCCCCAGGAACATGTAGATGAGTGCCACGAAGTACACAATGGCCCGCGCCACCTTGTCCCCTACTGATGGGTCCTGGGGGTTCCACACGGGCAGCACCACCCCGTCCGAGCAGCCCGACGCCGCCCTCGAGCAGTTGCCCCTCCCCCCGCCGACCGGTGCCTGGATCTCGCCGGCGCCGCACACCGGAGTCAGGGCCAGGACCAGCATGGCAGGGGCCAATAGGAGCAGCCGGGGGCAGTGCGTCTTGGAAGAGGGACGTGACATGGTGGCAGCAGGGGGCAGGAGATTAGCTTTtcc

Function

NR:

description
PREDICTED: sodium/calcium exchanger 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121633 True 913 TUCP 0.63 1 8686768 8687680

Neighbor

gene id symbol gene type direction distance location
AMCG00015376 NA coding upstream 31659 8627771 ~ 8655109 (+)
AMCG00015377 fkbp2,LOC106603154 coding upstream 73904 8608850 ~ 8612864 (+)
AMCG00015378 LOC105028067,LOC106563498,LOC106603157,LOC108412801,LOC108278882 coding upstream 90155 8591916 ~ 8596613 (+)
AMCG00015370 LOC102776143 coding upstream 114703 8552798 ~ 8572065 (+)
AMCG00015369 sart1,LOC107568296 coding upstream 162209 8514713 ~ 8524559 (+)
AMCG00015381 NA coding downstream 42294 8729974 ~ 8731761 (+)
AMCG00015383 NA coding downstream 48281 8735961 ~ 8742485 (+)
AMCG00015382 NA coding downstream 61207 8748887 ~ 8753046 (+)
AMCG00015391 arl2 coding downstream 110553 8798233 ~ 8800278 (+)
AMCG00015389 LOC102775858 coding downstream 114747 8802427 ~ 8809201 (+)
G97547 NA non-coding upstream 62081 8624089 ~ 8624687 (+)
G97543 NA non-coding upstream 70448 8613255 ~ 8616320 (+)
G97383 NA non-coding upstream 206231 8477222 ~ 8480537 (+)
G97350 NA non-coding upstream 436483 8248111 ~ 8250285 (+)
G97347 NA non-coding upstream 441781 8242777 ~ 8244987 (+)
G97560 NA non-coding downstream 4748 8692428 ~ 8692642 (+)
G97588 NA non-coding downstream 31561 8719241 ~ 8719562 (+)
G97612 NA non-coding downstream 89537 8777217 ~ 8779046 (+)
G97618 NA non-coding downstream 96066 8783746 ~ 8783991 (+)
G97619 NA non-coding downstream 96532 8784212 ~ 8785276 (+)
G97513 NA other upstream 141986 8543324 ~ 8544782 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other upstream 153364 8529018 ~ 8533404 (+)
AMCG00015365 naa40,LOC107750594,LOC107691908,LOC107749810 other upstream 253676 8342493 ~ 8433092 (+)
AMCG00015363 NA other upstream 274887 8382669 ~ 8411881 (+)
AMCG00015359 NA other upstream 374569 8307580 ~ 8312199 (+)
AMCG00015412 NA other downstream 109391 8797071 ~ 9124271 (+)
AMCG00015397 NA other downstream 141056 8828736 ~ 8893016 (+)
AMCG00015390 NA other downstream 189612 8877292 ~ 8884897 (+)
AMCG00015396 NA other downstream 264056 8951736 ~ 8953684 (+)
AMCG00015398 NA other downstream 283786 8971466 ~ 8978004 (+)

Expression


Co-expression Network