G97623


Basic Information

Item Value
gene id G97623
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9067943 ~ 9072295 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121733
TTAGAAGGAAAATGTGCAAGTCTACTATAAAAATACAGTCAACATATAAAATTAcagatgccttgtacttctctgtattttgcacttatgttgcaagtcgccctggataagggcgtctgccaagaaataaaaaataataacatgacCATAATCCATAATGGTATCAAGTTCTAGGAAGAATCTTTCATGTTCAATTGCTTTTCTGAATTAATtccaattaattttatattaaatcgTTCAGCAATAAGGGTTTTACATCCTACCACACAGAATTAAATAGTTCAATGCAAGGCCTTGAGTTGAACTGGAGGGCGATTCTACGTTGTGCCAAGATATCCATGAAACGGTTTGCTCTCGAGGGCTTAAGCATTACAACCTAGCCTTCACACTAAAACCTGGTTGTGGTGCAGCGATTTACACACCTGAAGTTGTACAGAACCAGCTCCCAGGATACAGagcatatttaaacatttttttttttagccaagATCTCGGTCCTGCAGGCCTACATACCTTTTTCTACGGAGCACCTTGACCCAGCTTTGCACTCACAAGATCAACGATACCCTGCCAGCCACGCAACAGTTGACAAGCCATGAATGCATTGATTTTACATTAATGCTCAATGGAAGATGATATTTAACAATTTTAGCAGGACTAAAATGGCTGATTTCAAACaagatttaaaaagcaatgcatgGTTAGAATATGCAAGTTAACATTAATgctttgcaaaaaacaaataagataaGACTTACATTTACCGATTGCCTAATAATCCTGCCATAGATCCTgacattgttttgcattatatatttttccttcatttcttgGACACAAGTACAAGTTGGCACAGGTCAAGAGATTTACACATACAAGTTACAGTAAACAGTAATTTTGTTCTGTCCGTTATGGTGAATAGGCCCTTAGGTTAGATGGCCAGCGGCCAACTGGGCCGCGATGTCGAGAATTGCAGAAAACAGCCTCCTCTGAGGGGGAGACCCATCCCAATGCATCGCCATATGCTGAAGGTCCTTTATGGGTCAGAGGTCAACCCCAACGGCCATAGATCCACACCCCACTACAGCCCCACAGAGGCACGGGGGCGGCTGCTACACTTGCACAGCTCTAGGTGAAGACATCATATCCTTCATCCGAttgcttcagtttttatttgtggtCCGGATTTAACGCAGCATAAACTCCTGCCATGgtctcctccccccccccccccccccccccccccccccccaacacccacGGTGTGACTGGGGCCAGGGCTGTGCGAGTGTGCCACCTTCCCCCACTCGCCTGGTCACATGGGACAGCTCCTTAAAGCCAAACAGATCAGATGGGAAGGGGGGGCTGCACTGCTGCACCACAAATGCTGATGAGGTCACCCTGCTGCCTGCATGGGCCAGGACTGAGCATGCGCACTCGGCCGTCTGGAACTTTCCATGCTCTTTAAACATGACTGATCTGAAAAGAGGCTGAAGGACAATGTTGTGTAAataccccccaacccccacacaaccacacaaccaCGTCACCACATATGGACACACAGCACCGCTAGAGACAGTGTAAAAACAAGTCAAACCTAGTTAAGACCGGTCGGGGTTTCTCAGTTCCGGTCCGGGGAGCCTAGAGAGTCCGACCACCGCCCAACGATTGTTccagaataaatacagattttacatCGCTATTACTGCCCTTCAGACATTGAAGCGCCACAGTAGACCCGGGCCATGAGGAGGACTGTACAGGATCCCTGGGGAAGAATCTAGAAACCCAAATACACTAAAGCAAATGTACGGTCGCTTCTTTACAGGATTAAATTGCGCTAATGAATAGGATCTCGCACAGCACGGCACGCAGCGGCGGGACTGACCGGCCACAAGTGCGAGGAGAAAATCTGCCTTTCAAAACCATAGAAAACGCCAAGATCCCCTTACACGTAACTTGGTTAAAATCACGGGGGAAATAGACATCGCAGAGTCGATTGTAATCGAATGCTCCTACACGTCCAGACCCTCATGGACAGGGTGTCCCGAGCGTGGCTCCTCGTCGCGACCCCCGTCTGAAGACCCAGTTGTCCACAACGTAGATACAAGTTTGCTTTGCTTGATTGAAGCGACCGAACGAGAAACTAGGCATCGTCCCacgaaaaaaaacaaaaaaacaaaaatcctggAGAAAAACTATGGGTGTCGCAACACCTCTAACCGGATGACTGGCTTTAAAATCTCTTGCACTGCTTTACCTCCGACAGCGCTTACAGGAGTTGTATTTTCATGACACCAAAGCATCGATTCGCCTTTCCTGCCGCACTCCTCAATACGCGGGGGCCTGTGCGGCCTCTTCGGGCTTCAATCGCCACCCACCCGCAGACCACCTTCCACGCAGCTAATTACTGCACGTAATGGCGTCACTGCTACCGTTTGATAAGCGGAGATACCGGGCGGTTTATAGTTACCTCTCGCCGGGGACAAACACACACCGAGTccacaaaacattaggaacagcTGGCCGTGGCGACTCCCAGgcttccccccctcctcccggGATCGCAGCCACCCCACGGTCCTGCAGGGCCCGCTTTTATGGGCGTCTGGGCCCCGCGGGTGTGCTGCGCGGTCAGTTGCCCGACCGTCCCTCTGCACAAGGCGGCTCAGCCTCCTCTGACCCCTCTCGTCAATGAGCCGCTTGCGCCCGCTGGCTGGAGGTCTTTTGGGCGGTGCACCATGCCTGATACACACGGGACACGGCCGAGCGAGAGAAGCCCAGCAGGGCGGCCGTCCTGGGCACACCCGAGCCGCTCTGCCCGGCTGAGGGCACTCCGATCCCTGGCCTTGCCATTTACCCGTGAGTGACGCGATGCACAACCCGCCTGTTACGGGTCTGTTTCACGGGAAgagcaggtgttcctaatgCTTTGTTCACTCGGTGCACATTACCCGTCACGCCGCTGCCTTCGGACACCAAACCTCTGCTCTGGCGGGTTGATCGCCGGGTGGGTCGGTCGCCGTCCAGGTCTCTGCAAGATACTGCAAACTGCCAGTTGGTGACGCCAGGAATGAAGTGCCGCGCTGCAGCTCGCATATTTATACACTGTAAACGGTACGCACTACCTCTTCATAAACCTTCCGCACAAGGCGGGGGAAGGTGGGGGTAATATAGCCCtccctattgttattgttccaTTTCCCAAAACGCAGGACagcatatgcaaataaatacacaatgtgtCCAAATCCTTATCGATATAGCTGTTCACTGGCAATCCTGATGTATTGCAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121733 True 3300 lncRNA 0.50 2 9067943 9072295

Neighbor

gene id symbol gene type direction distance location
AMCG00015406 NA coding upstream 4467 9056773 ~ 9063476 (+)
AMCG00015399 NA coding upstream 102293 8964460 ~ 8965650 (+)
AMCG00015395 NA coding upstream 138167 8926502 ~ 8929776 (+)
AMCG00015392 NA coding upstream 236229 8825512 ~ 8831714 (+)
AMCG00015389 LOC102775858 coding upstream 258742 8802427 ~ 8809201 (+)
AMCG00015413 NA coding downstream 55740 9128035 ~ 9138925 (+)
AMCG00015414 NA coding downstream 66909 9139204 ~ 9139449 (+)
AMCG00015416 NA coding downstream 83203 9155498 ~ 9175483 (+)
AMCG00015417 NA coding downstream 185887 9258182 ~ 9261673 (+)
AMCG00015426 LOC104961656,LOC102799013,LOC103359705,LOC106918378 coding downstream 251260 9323555 ~ 9326614 (+)
G97676 NA non-coding upstream 37544 9024645 ~ 9030399 (+)
G97663 vps51 non-coding upstream 83035 8983502 ~ 8984908 (+)
G97640 NA non-coding upstream 103825 8912014 ~ 8964118 (+)
G97650 NA non-coding upstream 117863 8942424 ~ 8950080 (+)
G97620 NA non-coding upstream 277276 8789560 ~ 8790667 (+)
G97737 NA non-coding downstream 147541 9219836 ~ 9220284 (+)
G97741 sf3b2 non-coding downstream 150341 9222636 ~ 9223257 (+)
G97745 NA non-coding downstream 165538 9237833 ~ 9238342 (+)
G97730 NA non-coding downstream 248747 9321042 ~ 9321684 (+)
G97770 NA non-coding downstream 255341 9327636 ~ 9331026 (+)
AMCG00015407 slc25a45 other upstream 31328 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 89939 8971466 ~ 8978004 (+)
AMCG00015396 NA other upstream 114259 8951736 ~ 8953684 (+)
AMCG00015397 NA other upstream 174927 8828736 ~ 8893016 (+)
AMCG00015390 NA other upstream 183046 8877292 ~ 8884897 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other downstream 552294 9624589 ~ 9631892 (+)
G98000 NA other downstream 633802 9706097 ~ 9710729 (+)
G98025 NA other downstream 684778 9757073 ~ 9760688 (+)
G98053 NA other downstream 743423 9815718 ~ 9872005 (+)
AMCG00015456 NA other downstream 779377 9851672 ~ 9862136 (+)

Expression


Co-expression Network