G97650


Basic Information

Item Value
gene id G97650
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 8942424 ~ 8950080 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121770
GGCAGCTCAGCCCAGTCACTGACACAGACCTGCGCGGCTGTAAACAGATGCAGTTTCCACGGCAACCAGAGGAGCACTCCGCTGGGCGCCATGGATACTATAGAACTgagcaacagagagagacagggagagaaatggggagagagagattgaatgGGAGCtggggaaagagagggaaagggagagacagaggggggtaagggggaggggggtaagTGGCGTAGAGTAAAAAGGGGGCCAAGGggatgtaattattattacctCTCCTCTATgccccccgtctctctctctctctctctctctctctctctctctctctctctccctctcgctctcagTGAGTGTTTTACAGActacaccaaaaaaataaatggtaccCTCGGCTCCACAGTGTAGgaagagggagatggagggagggatagagggaAGGGTtagaaggagggaggagagatagagagggagggcTGGGTGAAGCTGGCATTGcccacaaacacaacaaagagccgagacagacagacagagagagagagcaatgtaGAGAGTGACGGAGTGAAGGAAGGAGAAAGGACAAAGAAGGATAGATACAGTGTTTTGTAACACATATACCATAAATATAAAGTTCTATGCTACACTATACTCTACTtgactatactacactatataCTACACCAATACATCATCCCCCCAGAGCTGTGAGACGCTCCAATACTGATTCTGAAAAGGGCATCGCAGTGTACACCACACAcataatacacaacacacacaatacacaacaacacattatatacaatatacaatgtacacacattacaaaaacaaattaaacaatatataaaatacacaacacatcATACACATTACgtaaattatacaatacataacACACAATGCATAACTCACACAATAGACACAGTGTACAATACACAGTACACATATACAGTTCGCAGAACTACACATGCagttaaaacaatgcatattatacacaatacacacgATACATCATACAACAAAGATACaacacagaagaaacaaaacaatacaaacacagcacatatacaatacacacatactgacatAAACTGACATGCATTGACACAATAGCACACATACTGATTCACATAATGACAatcacacacccacactgatATACTAACgtatacactgacacacacaaactgacatactgacacactgacacacacaccagtgtatTATACCATAATAGATGGTCACAGTCTGTGATATCAGTCTACAGTGCCAGTGTACAGTAACAACTACTCTGTACAGTGTTAAAgttttacagtgtacagtgtgacAGTGTACAGTTGTACAGTGTGACAGTATGACAGTATACAGTTTTACAGTGTATAGGTTTACAGTGTGACAACATACAGTGTACAgttttacagtgtacagtatacagtgttacagtgtgaCAGTGTATAGTTTTACATTGTGACAGTATACAGTGTACAGTTTTACAGTGTGACAATATACAGTTACAGTGTGACAGTATACAGTGTACAATTTTACAGTGTACAATGTACAGTGTTACAGTGTACATTTGTACGgtgtacagtatacagtgttacagtgtgacagtgtacaattttacagtgttacagtgtggCAGTATACAGTGTAGAgttttacagtgtacagtgttaCAATGTGACAGTaaacagtgtacagtgtacagttTTAGTGTGACAGTATACAGTGTACAGTTTTAGAGTGTGACAGTGTACTGTGTAACAGTGCaacagtgtacagtgtacagttTTACAGTGTGACAGTATACAGTGTAACCGTATACAGTTTTACAGTGTGAGAGTATACAGTGTACAGTCTTAGAGTGtgacagtgtacagtgtacagttTTACAGTGTGACAATgtgacagtgtacagtgtgagtgTTACAATATACAGTGTGACAGCACCCCCCTGCTATACTCACATGCCAGATGATGAAGAAGATGAGGGCAGCGCACAGCACTAGCGTCAGCATGTAGCAGAACGCAGCGAACGTGAACGCCATGGCAACGCCCGCCAGCTCTCCGCCCTGCCCCTCCACTCCTCCGTTTGTCCACTCCTCCTCTACTGTATGACCGTTCCCTCACTCacgctccctccctctccctgtctctctctccctcacgcTCCCTCTCTCGCCTGCTtctcttgtgttgtgttgttttgtttttgtttggttttcctcTGTCACTCCTTCGtctccccccttctctcctcctctcctctcttcttttctcctctctccacgGGTGTCTTTGAGGGACTGCTGTCCCTCTGTCTTCTCTCTGtcccctctcctcttctccctctctctctctctgtctgtccctctatAGGAGCCACACAGTGTATAAGTCTTGGGGCTCCGGCTTCACAATGGGACACACCACacttatcaataataataataatattattaataataataaaaataataataataataaaataataataataatgaaattgtCTTAGTGCTCTTGAAAAAAATACCAAGGATAGTATTAATTTATgaccagtaataataataataacaataatacccAGAAGATTACCAAGAGCTAAAACGACACTGTCTACGTTATTGCATTTGACAACTTACAGCAATAATCCTCAtcactctcttcctcctcctcatcttcatcatcacGGTGCGAATAACAGGAccgagagaggagagagacggcaggcggcagcagcagccgcACAATCCTGGATGCTGCCTGCGTTAGATCTGAGAGTGCAGCTGCTCTGCCTGCCTCGaacacacagcaacagcaaccaTAATCACGAGCATGAGAATCATATGAATTATAATGCAATTGTCTCAGCGCGCACGCGGAAAATAATATCAAGGATGACACTAATTAATGGCCAATgagaataacaacaataagaataaataatatgtcTTAGCGCCCACAAAATGTAATACCGAGGATTAATACTAATCAATGgccagtaataataacaataataatatgaataataataagtaacTTCTCTCCGAGGCTCTGAAGTGCAGTCACTGGTCTTCAGGGAGGGTGGGAGAGGGATGAGAGCTCAGTGCCAGTCCTGCGAAGACTGGACTGGCAGTGCCTAGCTGTTGCCCATGGCAGTGCCTCTGGGTTAGGTCCAACAGCACGGGCTCCCCCAGCTTCTGGGTGTCAGTCCAGCAGCAGATCCAGGGCCCAGCCTTGGCTGTCCATCTCCTTGGTTGGTGTGGTGGAGCGATCGATCTGATCTTGTTGGCTGTGCTCCTGGACAGGCAGGCAGCCGGTCAGTGGGGCGCTCGGTGGGATGAgacgggaggaggagggaaggggagagggaagtagagaaaggagaaagaggaaaaagagaggggggggggggaacgaCAGGAGCTGCctaccccccctcctccctccccctcagagagctgaaaccaaaacaaaaaggggaaaaatggAAAggctgtttgtctctctctctctgaatccctctctctctctgtgtgcctctctctctctcagtctctgccTGTCTCGGTGTTGagctccctctctgtctctccctctctcggtcTCTGTCGTTCTCTCTCTCTNNctcgctctctct

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0099528 G protein-coupled neurotransmitter receptor activity molecular_function

KEGG:

id description
ko04725 Cholinergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU121770 True 3634 lncRNA 0.45 2 8942424 8950080

Neighbor

gene id symbol gene type direction distance location
AMCG00015395 NA coding upstream 12648 8926502 ~ 8929776 (+)
AMCG00015392 NA coding upstream 110710 8825512 ~ 8831714 (+)
AMCG00015389 LOC102775858 coding upstream 133223 8802427 ~ 8809201 (+)
AMCG00015391 arl2 coding upstream 142146 8798233 ~ 8800278 (+)
AMCG00015382 NA coding upstream 189378 8748887 ~ 8753046 (+)
AMCG00015399 NA coding downstream 14380 8964460 ~ 8965650 (+)
AMCG00015406 NA coding downstream 106693 9056773 ~ 9063476 (+)
AMCG00015413 NA coding downstream 177955 9128035 ~ 9138925 (+)
AMCG00015414 NA coding downstream 189124 9139204 ~ 9139449 (+)
AMCG00015416 NA coding downstream 205418 9155498 ~ 9175483 (+)
G97620 NA non-coding upstream 151757 8789560 ~ 8790667 (+)
G97619 NA non-coding upstream 157148 8784212 ~ 8785276 (+)
G97618 NA non-coding upstream 158433 8783746 ~ 8783991 (+)
G97612 NA non-coding upstream 163378 8777217 ~ 8779046 (+)
G97588 NA non-coding upstream 222862 8719241 ~ 8719562 (+)
G97663 vps51 non-coding downstream 33422 8983502 ~ 8984908 (+)
G97676 NA non-coding downstream 74565 9024645 ~ 9030399 (+)
G97623 NA non-coding downstream 117863 9067943 ~ 9072295 (+)
G97737 NA non-coding downstream 269756 9219836 ~ 9220284 (+)
G97741 sf3b2 non-coding downstream 272556 9222636 ~ 9223257 (+)
AMCG00015397 NA other upstream 49408 8828736 ~ 8893016 (+)
AMCG00015390 NA other upstream 57527 8877292 ~ 8884897 (+)
G97558 LOC107567908,LOC108428058,LOC107715375,LOC107568312,LOC108278532 other upstream 254744 8686768 ~ 8687680 (+)
G97513 NA other upstream 397642 8543324 ~ 8544782 (+)
AMCG00015368 banf1,LOC108439777,LOC106523121 other upstream 409020 8529018 ~ 8533404 (+)
AMCG00015396 NA other downstream 1656 8951736 ~ 8953684 (+)
AMCG00015398 NA other downstream 21386 8971466 ~ 8978004 (+)
AMCG00015407 slc25a45 other downstream 79477 9029557 ~ 9036615 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other downstream 674509 9624589 ~ 9631892 (+)
G98000 NA other downstream 756017 9706097 ~ 9710729 (+)

Expression


Co-expression Network