G97770


Basic Information

Item Value
gene id G97770
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9327636 ~ 9331026 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU121911
attttattaatatcacATTGACATCAGTATGTGaactatgttttttgttatttNNNNNNNNNNNNNNNNNNNNNNccccccccccccccacacacacacacacaccccagctGTCAAATATTAACTCAAGCCATAGCAAACACAAACTTTTTAAGCCTACACACATACACCTCTACCGTTACCAAAATAACAGAACACACGCAGAGGGAACCCTACACTTAATTCAGTTgtgtccccccacccctccctgcACGCACAAAAAGGAAATCTGCAAAAGAAATGTAAACTAAGGCCTAGCGAAGAAAGGGACTGGCTTTATTTAATGCAGTCGCTTCACAAAACTCACGgttaacagaaaagaaaaaaaaaaacgcatccGATTCTTACATCAGTGGGTGTTTGCCATTGGGGGGGGGCCTATAATCCAGCTCCTGCGAAGGTtgtctaacaataaattaaaaagaagcaaAGAGCAAGATCCTGATTTACCCGGTTGTGCTCCTATCCACCACCTTTCAGTTCCCAGATGGACACGGGTTGCTTCCTGTCCATTTTATTACCCCCCCTTCGCCGTTCTGGGATCCTAAAGCACAGTGACGCTGGGGACTCACTGGTATGTGTGTTTCAGGGTTTAAAAGCGAAATGGAGGATGTTAgcaacaaccaccacaacacGCATTAACCCAACCGAATaagcatttaagaaaaaacaaagcaaaaggaCGTTGCAGAGCAATCTACTTCAGGCGCGCCTTCATTACGCAGTGGCGGTCTCAGGGCGTCTGTCGCAGTGACCAGGGCTGGAGCCGTCGGCAAGAACAGGCGGTCCTCCCGGGCAAGTGGCAGAAATATAAAACACGAGGAATAAGTATAGAGGGATGGACCCCCCACCCAACAAAAAATGTTATCTTGATCTCAGACATCCAAGATCCACTACCCTCAGCAACGGCACTGAAGAGCATAGTAAATCTAacacgcccacacacacacacacacacgacatcATAAAACTGCCAGGACACGCCCACACACGCTTCAACAGGCAAAACAcacccactcccccccccccataaaacCAACACATTAACTATGTCTGTTTTCAAGATCGCAAACACCCAAAGGGCCAACTTGGGAGGAATGTTCTATTTAATAttagacaacaacaacaacaacagaagtaCAGCAGTTACAGACTTCATTTTTCTAGCAGgactacatttttattattttagaaaccaaaataaccccccacccctcaaaaCATCCTTCTAAACGATCCTACAACACATTCTTGGAAAATATTTCCCCCccgtttggaaaaaaaaaaaaactaaaaatgaaaggaCGAAGGGGTGGTGGGAGGGGCGCGCAGTGGGGTTTCACTCGGATGCTTTGAGGCCTAGTAGCTCAAAAGTGAAGTGTGTCAGAGCAATGCTGGCTAGGTGTCGCTGCTTCCAACTTTCCTGAATGCATCAACgtcctctacacacacacagatgagaCCGAGGACAGTGTAGACCCCACCCTCCATCCACATAACCACATCCCCAACTTCTCTGGATAAGCAGATCATTTCCCACAACCCCCCGCTGCCCTTCATCTGGCTAGCCTCCACTGAATGAGAATGGGGTTCAAATCTATGGCGTCTCAGAGCCGATGCCGTTGCCCGTGTCAGGCCTGGGCACgatttacttattttcctttttaccaAGGCTCCGTTACAGTGCCAAAACAAAAGCCTGTTGCATACCGAAGCAAGGGATCGTGGGTAGAGGAGCAGCCAAGGGGGTTAAAAACCGGAAATCTGACCAGCCATCTTTCTAGTTTGATCCAAAAACTTAAGCGACTGTAAATGGGAGAAAGGAGGGGCAGAATCTCGGTCTTCACTCAGAAAAGCACGTTAAAAAGTAACAATCtacctatatatacacatttataataaaaaaaaaaaaaaaaaaagcattgaaacAAACAGGATGAATACGACCCACGTAATCACTACCAGATTAATAGACATTCAGTGCCATTGCagatttagaaagaaaaataaaataatgcatcctGTGACGATGAGAtgtataaaagaaaatcatCCGGCATCACCGTTGGGTTTGCAGCGCACTGACCCAGAATGCCTGCTGCTGCGGTTCCAGTCACGACAAAAGAGCTGAGGTTTACAGATGCGCTGGAGAGaaaagtagtttattttttgaatactTCGATGTACCGCTTCCtaaccacaaacaaaaaaactgcccGACTAGCAAATAAACCCaaaaaaaccacaacaaaaaagcGACACTAGGAGCCGAAGAAACGGCAGACActtaaattaactgtaaatacaccaacaaataaaaaaaaaaaaaaaaaaggatttgtttACAaagtcagaaaacaaaatactatatatatatattttttttaaattattttctgttacagACTTTTGCTTGTCTTGCGAGAGACTATCGACAACAACCGCCCGTCCAGAACGACCGCTCAGATCCCGGATACAATACAGAAgatgcaaaacaaaagaaaagcaggtCATAACATCTCtcgccttctctctctctttttgctTTTGAAGGACAAACAAGTGTGTCTTATCAGGTTTATTGTACTTTCACTgtcgaaaaaaacaaaaaacaaacacgcatGGGTTTAGGGGCTCAAGCTGACGCGAGCAGATCCCCCGCCATGACGTCTAGTTACGCAGGTTACATTGAGTATTTAAGTAGCTTTTAATAGTCGGCTTCAGTGCAGATGTGGGATTGTTTCTTGGGGGACGGGGGGGGGGTACAGTGGGGGAGTTAGGTGATATTATTCTGCCTTGCGTTTCACTGCGCCAGGGATCTTCTCCTGAACCCTTTGACACTGCATTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121911 True 2889 lncRNA 0.44 2 9327636 9331026

Neighbor

gene id symbol gene type direction distance location
AMCG00015426 LOC104961656,LOC102799013,LOC103359705,LOC106918378 coding upstream 1022 9323555 ~ 9326614 (+)
AMCG00015417 NA coding upstream 65963 9258182 ~ 9261673 (+)
AMCG00015416 NA coding upstream 152153 9155498 ~ 9175483 (+)
AMCG00015414 NA coding upstream 188187 9139204 ~ 9139449 (+)
AMCG00015413 NA coding upstream 188711 9128035 ~ 9138925 (+)
AMCG00015425 men1,LOC103391704 coding downstream 17559 9348585 ~ 9355717 (+)
AMCG00015428 NA coding downstream 25937 9356963 ~ 9379060 (+)
AMCG00015427 NA coding downstream 52648 9383674 ~ 9387025 (+)
AMCG00015434 NA coding downstream 68404 9399430 ~ 9401380 (+)
AMCG00015433 LOC107596124,LOC107734132,LOC558044 coding downstream 84857 9415883 ~ 9435428 (+)
G97730 NA non-coding upstream 5952 9321042 ~ 9321684 (+)
G97745 NA non-coding upstream 89294 9237833 ~ 9238342 (+)
G97741 sf3b2 non-coding upstream 104379 9222636 ~ 9223257 (+)
G97737 NA non-coding upstream 107352 9219836 ~ 9220284 (+)
G97623 NA non-coding upstream 255341 9067943 ~ 9072295 (+)
G97777 NA non-coding downstream 14736 9345762 ~ 9347244 (+)
G97989 NA non-coding downstream 324442 9655468 ~ 9657866 (+)
G97998 NA non-coding downstream 371810 9702836 ~ 9703109 (+)
G97999 NA non-coding downstream 374698 9705724 ~ 9706036 (+)
G98060 NA non-coding downstream 547433 9878459 ~ 9879136 (+)
AMCG00015412 NA other upstream 203365 8797071 ~ 9124271 (+)
AMCG00015407 slc25a45 other upstream 291021 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 349632 8971466 ~ 8978004 (+)
AMCG00015396 NA other upstream 373952 8951736 ~ 8953684 (+)
AMCG00015397 NA other upstream 434620 8828736 ~ 8893016 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other downstream 293563 9624589 ~ 9631892 (+)
G98000 NA other downstream 375071 9706097 ~ 9710729 (+)
G98025 NA other downstream 426047 9757073 ~ 9760688 (+)
G98053 NA other downstream 484692 9815718 ~ 9872005 (+)
AMCG00015456 NA other downstream 520646 9851672 ~ 9862136 (+)

Expression


Co-expression Network