G98000


Basic Information

Item Value
gene id G98000
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9706097 ~ 9710729 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU122193
ccaccccctcatcTCTGACAATTCCCAGACTGGACACAGATATTAACCatactatatattaatatatgaaaaataattagagTTTtgacctaaaaaataaaaccaaacaagaaaaaaaaagggactCGAGACACAGAGTAAAGAGAAAGACGAGGCATGCtgcccctcactctctctcctctgttagaccccccccccccaccgacTCACCCAGAGAGGCACAGCTCCCCCCTCTCCGTGTCCCAAGTCTACCCCGCCAGAGACTGAATACATAGTCCAGGACAACTCGGTCTCACACAAGGGAGATTTCAATACTAGCCTTTTTTATGCGATTGGttgcattttacaaacaaaccaGCCTGTctcagaaaattaaataaataaatacataaataataaagatatcTAAAGCAGTTCCCACAGCCTGCTTTTTACCATGCACAGGGTGCCTGTAAGCGATGCCCCTAACTCAGATAGCCATGGACGTCTGAGCGACACTGATATAGGACCCTCCCCCTCTCATCTCCTGGCACTAGTAAccgtttaatacattttcatgcattttgcCGGGAGCAAGTGAAACCCGGAATGCTCACAATCAACTTGTGGGAGGGTCTTGGGCTTTGAGTTGacattaattaaactgattatCATTCCATCGTTCATTAAggaacaacaaaatgaaaacaagaaatgtcaCTTTTCTCCAGGACTTAAAACGTGTCGGCCAGTGGAAACCAGCCATCTTATTGCCAGAACACCTTAAAAAATTAATTCTTCAGCAAGGAGAACCAGGGAAAATGATTCGATTGAGCAGCTTACAGGCCAAAAGGAGAATTTGGGGAGTGGCGGGGCTGGGGTTTAAACACTGCGAATAATGGAGTCGGACGCCTGCACCGCATCCGAGAGCGAGGGTGACAATACACACCCCAGCCAAGCACATATGAGCATTTAATTGTGTCGTAAAAACAAACCAGTAGATATTGAAGAAACCGGATACAAAATTGTGAATGTACAGCCGGAACACCGTCAAGAATAGCAGCCAGGGGAGCTCCCCTCTTCGAGTCAGCTTACTCTCCTACTGAAAGGTTCACTACCCCTGCCATCAGAACACAGGCAGTTAAACATGATCCAACCCCAGAAACATATTAGACAGAACCACCCCCTCCTCCAAAAATCCTTGAACTGTAATTACAATGCCAACAATGAACTCGACAGCCACAACTGAGTGAGGATGCCAGGGCCTACTGACGTGAAGTCACACAGGCCTCTCCTTGCATGAAGACCACCTCCATAACCCGCTGGACCCTGGATGGGGGGGAAATCTAGTCTCTGTTCCAAACCAAGCTCTTGAGCATctcaaatcaaaaccaaaactcTTAATggagttactttttttttttcccccatgccCCCCACTGTAAACAAAATCACAGAGAGCAGAGTTTTGAGAAGCACCGACTGGTTCctgaaaacaatcacaaaaatTCCCAGTCAATGCATCTttcttgattttaaattttatttattatcattattatcgtTAGTTTTTCATATTTGCCAACTTTTTCTCAAGACCCAAaggtggaggggaggggaggagaggagagtgtgagagtgagtgtgtgtgtgtgtgtgtgtgtgtaacttcAAACACCAGCCTAGACAACACACCCTCCCACAGTAGCCCTTCAACACAGCCAGCTGGAAGGATGCTGCTCTAACGAACCCTTCATTAGAAGCTGGGGCGGAGGTCCGGGGTGGTTTCGGTCAGAGCCGGTGTTTGGGTCCCCACTACACACAGTGCTGTACACAGTGCCACTGCTCTGGGAGGCTCGCCAAACACGCTGGGGCCGTCTCGGGTACTGGGTTAAATATAACTTTCTTAATTctgggaaatatatatacaagacAGGTTCAGCGACTCCACTGGCACAGACAGTACACCTGcaaacccccccctccccgttTGCTGGCAGTGAGGAAGGAGCACTTACACAGTCAACAGGTTGCAGGCCTCGTATCACACCCGAAGTGCCCCCCCCTCAGCGGTCTCAGTAgtacaaaaacaaggaaacaaacacacacacacacacacacacacacacgcacgcacaacATCAACAAATTACAGATCGACATCCTTCCACggttgtgtgtgtatcagtgcaCCGCAGTGAGGGAGAGCCACAAGTCACCTGGGGTTTTCTGTGGGGGGGAAACCACTGAAACAAGCCTATCAGCCCCCACCTCCCCTATCCCAGAAAACACCCTCAGCCTTGTGGATCCCGTTGTACATTCAGCGACTGACATTCACTTCCTGTCTGGTGTGGTGACATCATCCCCTCAAATCTGACCAATCGCCCGCTGCTCACTGTCACATGCTGGACAAAACCGCAGCCGTCGGTACCCAGTGGATATCCTGAGCCCAGCCCACTCACTTAACGACACGACTGAATTTGCCATTTCACAACACGACAATTGACACCGCCCTCCCACTCTCCGGAAAGGGCCGGTACGGATGTTGTGTATTGTCGGGAACATAAttagcagattttattttccctcgCACTCTCCCCTTTCCTAGTCTTCGAGGTTGTCAGTGGCTCAGTTAAAGGCCGGCACGATTCTTTGATGAAATCCCAGAGGGGGACATTCGGAAAGCttacatttgtgaataatcgAATTCCATTTAAAATGCCGATCGTGAGATGCGGCCCAAATACGACCCCTGGCTGGATTCAGTGACAATCGGGAGTGGGTGAGGTCTCCTAAACgttgagaaaaaaagtttgctCATTGCGttgctttccaaaaaaaaactataaaacctCGAGCCATGTCTGCGACTGAACTTCGAAACAGACACGGTATGAATTGCACTCTGAAGTTAAACTGGGGGCGATGCCAAACCAACGCAATACTGATACAACGCAAACTAGCCAACTGAATATGCACACGCAATCCTGAGGAGCTGTAAGAACTGTTTCaatgaactgtaaaaatgtCCCTGTCCTTGCTTACTTGGGAGACTTCTGGTGGCACTGCGATCAGTTACATGGGCACCCCTCCCCCAACAGGGAGCATCATCTACAACCGCAGACCACTGGATTAACAGATTGTCGTAGGGGCCCtgggaggtcagaggtcacacaCAGCAGACAGGAGGCGAGGACACTGCTGTGTTCCTCCAAATCCAGCCCTCCAGAGCCACAATACTGCTTTTCTTTATCTATgcacttttatacacacatttatgtattcaCTTTACCTCAGCATTCACTGGGGGCCCGAGGGTGGCAGGAGGGGCCGGGCAGCTGTGGGCTCTGGAGGACCGGACGCGAGGATCACCCAATCAGGTCTGCATTCAGGGCATCGATGCCTCGAATCCCTTTAAAACAAAGTCCACCTACAGATATCACTTAAAGGGCAGGCCCGAATGGTCTGCTGCGTTGAAAATGACAAACCAGGCGCGTGGGACGTCTTTTCAATTTCGCTGCGTGTGCTGCTGTCAGGAAGAGGCCAATTGGCTACTGGTGTGGAGAACCTTACATtcctccccccctccaccccccaccgaaaaaaattgcatttgttaaGGCAGGCGGCAGTTTAATTAGTCCGGGAGGTGTGGTCACACGGAGTGAGCGAGGGGCGTCTCCAGTTTAAAATCCCCTCCTGCCACCTTTCAGTTccacaaatgttatttttttctctgtctcgTCTGTACAAACAACCATGCCTGCATCCCCATGCGCCAATCCAtccatttttaactttttttgagGTTGGGGGTCCCTTTGTGTGCTCTCCCTCGAGTGATATCTGTAGACTGGCTGGCACAGGGTTTTATCAAGTCGGTGTGCAGAAAGTTGCGGCCCAAGTGCCAACTTTGTCCCAGTGGAGTCAATTCCACAGctgtcacactttttttttcttccttcactTTGTGTACAAGTACGATCAAAATGCAGACATGTGACGTGGGAGGCAACGGAGAGGCAGAGTCAAGAGGTGCACACAGCCAGCCAACCAACCAACCGTGCAGGCGGTCTAATACGGAATGAAGCAGTGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122193 True 4078 TUCP 0.48 2 9706097 9710729

Neighbor

gene id symbol gene type direction distance location
AMCG00015450 LOC100695529,LOC102800049,LOC102202559,LOC101072470 coding upstream 3325 9697300 ~ 9702772 (+)
AMCG00015443 LOC108440852,LOC107597921,LOC107683583,LOC107558412,LOC107710341,LOC557645,LOC107679244 coding upstream 61869 9643122 ~ 9644228 (+)
AMCG00015444 NA coding upstream 81515 9621732 ~ 9624582 (+)
AMCG00015435 NA coding upstream 120560 9572868 ~ 9585537 (+)
AMCG00015436 NA coding upstream 207118 9473172 ~ 9498979 (+)
AMCG00015461 NA coding downstream 61845 9772574 ~ 9810428 (+)
AMCG00015455 NA coding downstream 105402 9816131 ~ 9819910 (+)
AMCG00015457 NA coding downstream 114186 9824915 ~ 9842408 (+)
AMCG00015458 NA coding downstream 153019 9863748 ~ 9868818 (+)
AMCG00015459 NA coding downstream 158413 9869142 ~ 9872454 (+)
G97999 NA non-coding upstream 61 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 2988 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 48231 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 358853 9345762 ~ 9347244 (+)
G97770 NA non-coding upstream 375071 9327636 ~ 9331026 (+)
G98060 NA non-coding downstream 167730 9878459 ~ 9879136 (+)
G98195 NA non-coding downstream 485898 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 612529 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 628379 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 654653 10365382 ~ 10365647 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other upstream 74205 9624589 ~ 9631892 (+)
AMCG00015412 NA other upstream 581826 8797071 ~ 9124271 (+)
AMCG00015407 slc25a45 other upstream 669482 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 728093 8971466 ~ 8978004 (+)
AMCG00015396 NA other upstream 752413 8951736 ~ 8953684 (+)
G98025 NA other downstream 46344 9757073 ~ 9760688 (+)
G98053 NA other downstream 104989 9815718 ~ 9872005 (+)
AMCG00015456 NA other downstream 140943 9851672 ~ 9862136 (+)
AMCG00015464 NA other downstream 218863 9929592 ~ 9930846 (+)
AMCG00015475 NA other downstream 290485 10001214 ~ 10012888 (+)

Expression


Co-expression Network