G98025


Basic Information

Item Value
gene id G98025
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9757073 ~ 9760688 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU122221
AGGGTACCATCTTTCTTCTAACACAGTcgaagtgtgttatttatttttaaccacaatCCTCTGCGAAATGTGTCTCAACCAACCGCCTCCACAGGCCCTTCACTGAGGACAGGTCTGCACAACCTGCTCTGTGGCCACGACATTACGACAGGCCTGCTGTGCAGACGCGTCTCCTCCACACGGGACTGAAGCGCGTTGAGCCGCATCTGAGCAGCGCCATCAGCGCCAGCAACGACAACATGTACTGCACTGAGTCGGTGTTATACTTGCCAACATTGAATGTAGAACATATTTACcgttttttatgcatttattattaattattcattaatgttatttacagatttaaaatatccatatttagacgtttaacagatttaaaaagtggattatcccacagatgtttaatgcataatatgctgtatataactgtatataaaaaatattgtattatgcattatttgacATGATAATActaattttcagaaaagcatatttagggtaaataagtaaaatgaattcaaatgatttaattttatatactgt
>TU122222
ATGGCTACACGCGTACAGAACAATTCGTGTTCGGTGCTGGAAACGTGGCTCTGGTGGTGTGAGCCCCAGGCACACAAACCTAATTCCTGAACACTTCTCAtcattttgtgtgtttcctCTGCTTGGGATTTTTTCCTTTACCTCATCAATGAAGTCCGTTGTTGCTGTAATTCAATTGATTTTTCTATTCCTCTTGATGGGAACAGGGAACGCATCCCCCCATGCCCTGGTGCACATGGGCGCGCTCCTCTCCCCATCTGGCCCCTTCCTGCACTCCACTCTGCTGGACGGGCTGCCGGTCGCCCGGTGCAAGCCAGAGAAGGAGATCCTGGGGCCGACGCAGCCGTGGGTCTCAGCCGCACTCGGGACAGAGGACTGGGAGAGGGGAGACCGAATGTGCAGAGAGGAAAAGGCCAGGTTCATGGAAACACTCCTGCAGCTGGGAGACCCCCCAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106588115

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122221 True 546 lncRNA 0.37 2 9759572 9760688
TU122222 False 456 TUCP 0.56 3 9757073 9758430

Neighbor

gene id symbol gene type direction distance location
AMCG00015450 LOC100695529,LOC102800049,LOC102202559,LOC101072470 coding upstream 54301 9697300 ~ 9702772 (+)
AMCG00015443 LOC108440852,LOC107597921,LOC107683583,LOC107558412,LOC107710341,LOC557645,LOC107679244 coding upstream 112845 9643122 ~ 9644228 (+)
AMCG00015444 NA coding upstream 132491 9621732 ~ 9624582 (+)
AMCG00015435 NA coding upstream 171536 9572868 ~ 9585537 (+)
AMCG00015436 NA coding upstream 258094 9473172 ~ 9498979 (+)
AMCG00015461 NA coding downstream 11886 9772574 ~ 9810428 (+)
AMCG00015455 NA coding downstream 55443 9816131 ~ 9819910 (+)
AMCG00015457 NA coding downstream 64227 9824915 ~ 9842408 (+)
AMCG00015458 NA coding downstream 103060 9863748 ~ 9868818 (+)
AMCG00015459 NA coding downstream 108454 9869142 ~ 9872454 (+)
G97999 NA non-coding upstream 51037 9705724 ~ 9706036 (+)
G97998 NA non-coding upstream 53964 9702836 ~ 9703109 (+)
G97989 NA non-coding upstream 99207 9655468 ~ 9657866 (+)
G97777 NA non-coding upstream 409829 9345762 ~ 9347244 (+)
G97770 NA non-coding upstream 426047 9327636 ~ 9331026 (+)
G98060 NA non-coding downstream 117771 9878459 ~ 9879136 (+)
G98195 NA non-coding downstream 435939 10196627 ~ 10197404 (+)
G98255 NA non-coding downstream 562570 10323258 ~ 10323970 (+)
G98244 LOC106578020 non-coding downstream 578420 10339108 ~ 10340845 (+)
G98277 NA non-coding downstream 604694 10365382 ~ 10365647 (+)
G98000 NA other upstream 46344 9706097 ~ 9710729 (+)
AMCG00015445 LOC102291110,LOC108440839,LOC107679294,LOC107731944,LOC102201806,LOC102799004,LOC108268318,LOC107558438,LOC570544 other upstream 125181 9624589 ~ 9631892 (+)
AMCG00015407 slc25a45 other upstream 720458 9029557 ~ 9036615 (+)
AMCG00015398 NA other upstream 779069 8971466 ~ 8978004 (+)
AMCG00015396 NA other upstream 803389 8951736 ~ 8953684 (+)
G98053 NA other downstream 55030 9815718 ~ 9872005 (+)
AMCG00015456 NA other downstream 90984 9851672 ~ 9862136 (+)
AMCG00015464 NA other downstream 168904 9929592 ~ 9930846 (+)
AMCG00015475 NA other downstream 240526 10001214 ~ 10012888 (+)
G98093 NA other downstream 324740 10085428 ~ 10086512 (+)

Expression


Co-expression Network