G98310


Basic Information

Item Value
gene id G98310
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10489908 ~ 10493701 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU122622
ACTGTTTATTATGACATCACtggaagaaaaaggaagaacCCATAAAAAAAGTAACATGTACATCCCCTTTAATTAGACCTAATAGAGAATGGTCTtctaatataaatacatatttaacagaaacaatgaccGTGCGTTACATTCACATGCACAAGATTGATGGGTAAAGGCCACTCTTCTACAGCATCATACCCGGATTACATATGATACCTGTTTGTGATTAAAGTGGCAGGATTTAAAGCTTTCTCCACTACACCATTTCAAGCTGATATTTTTCCAAGGGTAGCATCtatgttttgctgtattttaaccAAGCAGGAGACATTTTATTCAGTATGGACAACAGTATCGAAAATCCTACAAATTTtatgcacattatatataattatatatatatatatagactgtGTACAAAAAATTGGATTCAAGTTCCCCCATTTACACTCTACCCAGTTTGACTTCCCATTCCATTTTTATATCGAGAACCTTTtttgcatatttgacacaaCTGTACCAGAACAGGACGGCAAATTACCACttgaccacaaaaaaaaaaaaaaaaagccgaCTTAGAAAAGTTCTGCCCGGAGGTGGTACAACAACGGGGGCCTGTTTAGAAACATCCAAACCCATTCACCACCTCCAGTTAATGGAAACAGCTAAAGAGAGGCTGTCTGTACAGCCGACACGCGTAACAGCGCCgtttttgtgaaaaacatcCCTTCGAAATGGGCCTGGAAGTCAATCTGGGTCGTTGTGGACTGGAGGAGCTACTGTATCCAACACTGGCACTGTAATGCAGAACAGTCATCAGAATAATGAAAACCTGCACGCAAACTTAGTCATCGCCGCACCGTTTAAACATTAGGATCTGAATTGATTGTGGCCGCGAAACGGTAGGCTTTCTTTCAGGTTCTCCGCTCTATTCAGGCTTTCACGTGTCAAGTGTTCCGGGGGATGGTTTGAAATGCCTGGTGTTTTATTTCCTCTCCCCACAATTAGTcatctcaataaataaatacaattgaagtCACTGCTGCTTTAAAGCAAAATCTAAAGAGGGGAGCAGACAAGACGTAAGTGCATGGATGCTGGTTGGTCCTGCATCACAGTGTATGGCCCCGTCAGCATTCAAATCGGTGCAGGTCCTCTTTGACCCCTTTTGGTGAAGTGGCACTATTGATTTGATACGATATCAGTATAGAACAATGCAATGTTCCCAAACTCCCTGATCTAACGTGTATACATATGTAAGGGCTTAGAAGAAAAAAGGGTTAATGTCATGTCATAatgtagaaaaatacattcaaacgCTTCATCAATCCAGGCATTGGTCATGACCCTGACCACTGTAAACATGACTGAGAAAAAGACGACAGGAACAGAGTGATGATTCTAAACTTACAAAGGAGGCAGCAAGAATCAGACTGAAGCCACTTCCCCTCTGGGCCCAACTGCCAAGGCTGGTGTGCATTCCCTCACCTCCGAGCCCCACTAGGACAGCTGGCAGTGTTCCCAATTAAGCTCTACACGAGGGGGCATGTTGTGTCCTCTGTGAGTAATACTGAGCACAGGGCCCTGACTCATGAGCGGTTCCTGCACCAGCCGGGACAAATCGGGCCCTTCACTCTTACAATAAGCCATTAAGCCAGGCTTGTGTTGTTTcttctcacacacatacatacactatataaataatcaatcaatatcACTCTCTCGGGACAATCCCTTTATCCAGCTGCATTCTCACAGCACCACAACTACCTTCTGCAATAGCCCAGCGTACACAAACACATGTGGTGTAAAGATGACACAAATGGGGCAATAGTGGGGGGGTTATGTTagaatgaaacacaaaacaaagtgagAACTGCAGAGCTACAACAGAGGTGGACAAGTCATGAAAGTGTCCCCTTCAATGTTCCTGAAAGGAGGACATCCCATAATGCACCTCACCACATTGATGTCAACAGGCTTGTCACCGGAAGACCAGAACTACAGAGGTAATGCCCCAGTCCAGGGGTTGCATGTGATCACTGAGTAACCAGGAGCATGTGGCAATTCAGACCAGAGTCACTACTTAAAgggattttaaataattaaataaatctgaaatctCTAGAACTTTTGGTTCCTGGTCAGTTTGGGACACCAGTTCCATTACAAcatacttaaaaacaacacaaaaaacataaaaatacaaaatccataTAAATAAGCATCAACCTGGAGACAGAAAAGGCCCGCAGGTTGACACACAAGTGCacacagaccacacacacatcctcGTTTCAGTAGAAGGCAGTCCAAGTTTAACGACCAGATTCCAACCTGGCAGATGCCacttagttgttttctttttccagtcCTTTAATGAATACTGCCTTTCGGGCATCCAAATGCAGCCCAatagttttaaatgcatcggatGTCCACCAGGGGGCACCAGACCATAACAGTTCCGCGACTATGGACCGAGTAGGATAAATAAACGggtcaatttatatatttttcaaatacttCACACCTGTAAGCTTTTTGAAACAAGTCCGGCAACTGTCCTCGCGGGGAATCGGACGCACTCTCCGCACAGGCGAGGATGAGGAAGCGTCCGCACAGCGAGCTGATCGGcgcaggactggagtctgacagccCTGGTCTAGGGCAGTGGTGCCCAAACACAGTACTGGAGAGCCCCCGTCCACAGACTTTTGTCagtcaacaaaaaaaataaataatgttgaaaGACTGGGAGCACATGTAAGTCATTGATCAATTAAGCCAATAACTTCTCCCATTAAGGGAATTCTGGTCATTGAGAGCTGAACAGggcagtaaaatgtatttaaatgtcattaacgAATCACCTGCTTAACTGATGCTCATGGGTTACCTATAAATCCTATTAGAATAGGGGCTCTGGAGGGCTGGGTCTGGGCAGTACCGCTGGGTCACATGGCCCGGCTGTACGGCTGCTTTGCACGGAGCCCCCGGGCTCAGAGGCCTCGATGCCCGGGCTGACGATGGCTGCTAGGATCCACGCAATGAAGAAGAATAACAGACCCGCTTCCGCTACCGTGCACCGCATTGTAACAGGTCTCTGCAGCCTCGGAAAATTACAGTCCTAATCCCCCCTCCCTTATTGCTCAGATCCCTTTTGATATGTCAAGCTGCCATTTTAAGTTCccttttgccccccccccctttcaaaatgtcctCATGATGCAACagcaactaataataataatataatacataataacagtacagtacagtacggggggggggggggggggggggggggggcagggtctGCAGCCCCTCGAGTTGCTCTGAGGCCGCCCTGCTTCAGAGAGCTGGCCCTGGCCCTGGAGAGCCACTCTGCAGGGTCTGAACAGCGCTGGGGGAGTGAAAAGACAAGCCCCCTGACTGGCATTCTGAATACTGAAGGGAATTACTATAGGGgaccagactggagccagcgctgtggggactggAGAGCCCAGTCCTTGCATACTCTACTGTGCAGTGGGTGCTCCACAGCCAGGCCTATAGGGCCACAGATCAAATCTGAGGCAGACCGCAGACCCCTTAGACCCCGAGCATGGGAGCCAGGCGGGATGGAGAGAAGCGGCGGCGCATGGGAGACGAGCCCGGGTGCACGGTGTGGCCCCTTTACACCAGGGCCCTCAGGGCAAAGGACAGCGCGGCCCCCAGGGACAGACCCAGCGCCAGGAAGAATGTCATGAGTGCCCCCGCCGTCTCCGCGTCCTGGGGCTCCAccagcctgagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122622 True 3794 lncRNA 0.47 1 10489908 10493701

Neighbor

gene id symbol gene type direction distance location
AMCG00015505 LOC103385808,LOC107690779,LOC103366237,LOC103033313,LOC102208922 coding upstream 591 10484942 ~ 10489317 (+)
AMCG00015502 NA coding upstream 46281 10435851 ~ 10443627 (+)
AMCG00015503 NA coding upstream 95278 10390293 ~ 10394630 (+)
AMCG00015498 NA coding upstream 184136 10303739 ~ 10305772 (+)
AMCG00015491 NA coding upstream 200518 10277440 ~ 10289390 (+)
AMCG00015512 NA coding downstream 18934 10512635 ~ 10517039 (+)
AMCG00015509 NA coding downstream 46219 10539920 ~ 10541947 (+)
AMCG00015511 NA coding downstream 49561 10543262 ~ 10546764 (+)
AMCG00015510 sssca1 coding downstream 54075 10547776 ~ 10553456 (+)
AMCG00015513 NA coding downstream 60965 10554666 ~ 10555449 (+)
G98299 NA non-coding upstream 57864 10428585 ~ 10432044 (+)
G98282 NA non-coding upstream 110877 10378607 ~ 10379031 (+)
G98277 NA non-coding upstream 124261 10365382 ~ 10365647 (+)
G98244 LOC106578020 non-coding upstream 149063 10339108 ~ 10340845 (+)
G98255 NA non-coding upstream 165938 10323258 ~ 10323970 (+)
G98311 NA non-coding downstream 823 10494524 ~ 10494951 (+)
G98312 NA non-coding downstream 3135 10496836 ~ 10497062 (+)
G98338 NA non-coding downstream 36259 10529960 ~ 10571890 (+)
G98398 NA non-coding downstream 214720 10708421 ~ 10708753 (+)
G98422 NA non-coding downstream 326047 10819748 ~ 10820170 (+)
G98302 NA other upstream 39245 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 71208 10411887 ~ 10418700 (+)
G98251 NA other upstream 172583 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 267412 10213001 ~ 10222496 (+)
G98093 NA other upstream 403396 10085428 ~ 10086512 (+)
G98402 NA other downstream 242278 10735979 ~ 10741133 (+)
AMCG00015528 NA other downstream 378969 10872670 ~ 11227821 (+)
AMCG00015539 NA other downstream 565789 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 864451 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1940465 12434166 ~ 12462665 (+)

Expression


Co-expression Network