G98422


Basic Information

Item Value
gene id G98422
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10819748 ~ 10820170 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU122777
TTTTGTCCAGCACCTCCTCGTCCTCGCATTTCACGTCAAAGGTCTTCAGCTCCGTCTGAATCGCCTCAGTGGTGTCCGCCGCCATCGCCGCGTCCCTGGGGGTGAGGGGGGACCGTGGGGGAGATCCGGGGCAGCCTCGCCGGTCCGCTTCCTGGAGTCGCCTGAACCCGCAGCAAAGACGACCGTCGCTTTGTGACTCTTCTACCGCCTGTTGCACGGCCAGCGGGGGCTGTGAATTATGCGATGTAGCTTCTGCGACAGGGAGAATTATTGTTAccgttataattataatacttattattatatacGATTGTTTTCGGATTATTCTCCCGTGCTGCCTGTCAGTCTTTTCCCATTTGCCGCGAAAACAGAGGAGCCCCGCCTCCTGCGTCACGCTACGTCCCCGCCTGCGCAACCAATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122777 True 423 lncRNA 0.57 1 10819748 10820170

Neighbor

gene id symbol gene type direction distance location
AMCG00015520 LOC106560356 coding upstream 47184 10769384 ~ 10772564 (+)
AMCG00015521 NA coding upstream 77343 10739470 ~ 10742405 (+)
AMCG00015522 NA coding upstream 82773 10735359 ~ 10736975 (+)
AMCG00015516 NA coding upstream 193684 10613408 ~ 10626064 (+)
AMCG00015517 LOC100380650 coding upstream 215686 10567509 ~ 10604062 (+)
AMCG00015529 NA coding downstream 91280 10911450 ~ 10922530 (+)
AMCG00015537 NA coding downstream 347117 11167287 ~ 11175559 (+)
AMCG00015538 NA coding downstream 517176 11337346 ~ 11342116 (+)
AMCG00015546 NA coding downstream 531801 11351971 ~ 11354018 (+)
AMCG00015547 NA coding downstream 533901 11354071 ~ 11356899 (+)
G98398 NA non-coding upstream 110995 10708421 ~ 10708753 (+)
G98338 NA non-coding upstream 247858 10529960 ~ 10571890 (+)
G98312 NA non-coding upstream 322686 10496836 ~ 10497062 (+)
G98311 NA non-coding upstream 324797 10494524 ~ 10494951 (+)
G98310 NA non-coding upstream 326047 10489908 ~ 10493701 (+)
G98430 NA non-coding downstream 103962 10924132 ~ 10938566 (+)
G98442 NA non-coding downstream 168686 10988856 ~ 11019109 (+)
G98569 NA non-coding downstream 646682 11466852 ~ 11468628 (+)
G98590 NA non-coding downstream 727395 11547565 ~ 11547819 (+)
G98625 NA non-coding downstream 1579563 12399733 ~ 12405119 (+)
G98402 NA other upstream 78615 10735979 ~ 10741133 (+)
G98302 NA other upstream 369085 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 401048 10411887 ~ 10418700 (+)
G98251 NA other upstream 502423 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 597252 10213001 ~ 10222496 (+)
AMCG00015528 NA other downstream 52500 10872670 ~ 11227821 (+)
AMCG00015539 NA other downstream 239320 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 537982 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1613996 12434166 ~ 12462665 (+)
G98759 NA other downstream 2155469 12975639 ~ 13046813 (+)

Expression


Co-expression Network