G98430


Basic Information

Item Value
gene id G98430
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 10924132 ~ 10938566 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU122795
tttttttatgttgttttattcgTTTTTTATTCCAAGAaggtgtttttcctttttccttttttgtttaaggCTCTCATATTCTCACAATGGGAGCacagtcTGGATGATGACCAGGTCCCCCCAtggcccccacccccccactctgtTCCTAGGTAGACTGCAGTCAGTGTGGCGGGCTGGCTCAGTGTGAATGCCTGTGATCAAGTCCCCTGTTCTACCTCAATAGGAGCTGTTTCCACTGCCCAGGCCTATCCAAGCCTGACTCTGGGTGACTTCAGAGAGATCGCTTGCCTTTCTAAAGTCTAGCCCAATTCTGCAACGTTTATcgattaatataataatttcccCTGTATGGAAATATATTCCTCAGAGAGTTCCCTTCCTGGCTTCTCCGCTGTCCACTGGGCATTTGATTTGATGTAAAAGGCAGTCTTGTTTAGCGGCTCCAGCCCCATGGGGACACACACCACGGAGCCTGCAGTGGCCCAACACTGGACTGTGCCGAATAGGGTGTGGAAGGAGGGGGACGGCTGGGCAGTGTAATGGCAGCTCCAGGACTCCAATGCCCCGGACATATTCTCATATGAAACTTCCTCTGTGGGGCCAGCTCACTTCCTGACGCTTTCAAACCACTCCCCCCTACCCCACCCTACTATACCCCACCCCTCCCCTGCCCCGCCCCATAACCATGGCTACCACACGCTCATCTCAGTGTCACACCTGCTTAGCCACAAACAAgaatagaagaaaatatatgaTAATCAGAGCTTCAGATCTGAtttcccttatttatttatttgattcggtttttttttaaattattgattatGTTCTTCTGTTGTCAACAGCTTCCTGACTACTGTTAAGACATACGTGACAGATCACAGTACCTCTGCTAGGGGGACTTTATCACAGGCCTAAAGAAGGTGGACAATGGTGCAGTAGCGTGAGGAGAAGTGACCATCGATAgcttttctaaaacaaacactgcatgCATCTGCAAAAAAGTAATCAGCCAATATTAGGTAAGGTACTttgcctttttctctttcagagatttatttattttgatttgctttctTGCCCCGAAAACCCCAGGGAGAGGGAGGGTTTGCTCAGCATATACTGATAGGATAACAGAGGTGAAAACGAacacaaaccaataaataaatagataaataaaaaaggtataGGGGACTAGAAATTGAGACGTCATTAAAGCCTTGTTACCACAATTGCTGAACGTGAAATCCGAGCCTGTACTGTTGGGTGGAAGATGTCAATGGGAGAAGggatttaagaaagaaaatgacagattTCACATAGGGGATCCCTGCCAGGGTGATTACAGTGACATCAGGGGTACATCAGCCTTTCCGATGGTAATCTGCTAATGGCATGtgcaaattgtgtgtgtgtgtgtgtgtgcgcgtgtgcgcatgtgtgtgtgtgtgtggaggagtcTGAGCAAAGCCTTCCTATCTCTGTGTATCTCAGAGCCAGGATGGGATGGGTGGGGGAGTGGgaggggggggctgggggaTGAGAGTAGAGGACAAGGGACGAGGTGGGGGAtgagggaggggggggcggggtTGTGGGTGTGCTTTACAAGTCGCTCTCCCCATACAGGGCGCTGGAGAAGGAGATGTAGTCCAGGGCTCCGGGCGCCGCGTCCGAGCCGATGTACTTGGTCATGCGGCTGATGCAGTACTCTGCCTGCTCTGGGGGCAGCTCCCGCCGCAGCTCGTCCACTggatggggagagcga

Function

GO:

id name namespace
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034704 calcium channel complex cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122795 True 1771 lncRNA 0.49 3 10924132 10938566

Neighbor

gene id symbol gene type direction distance location
AMCG00015529 NA coding upstream 1602 10911450 ~ 10922530 (+)
AMCG00015520 LOC106560356 coding upstream 151568 10769384 ~ 10772564 (+)
AMCG00015521 NA coding upstream 181727 10739470 ~ 10742405 (+)
AMCG00015522 NA coding upstream 187157 10735359 ~ 10736975 (+)
AMCG00015516 NA coding upstream 298068 10613408 ~ 10626064 (+)
AMCG00015537 NA coding downstream 228721 11167287 ~ 11175559 (+)
AMCG00015538 NA coding downstream 398780 11337346 ~ 11342116 (+)
AMCG00015546 NA coding downstream 413405 11351971 ~ 11354018 (+)
AMCG00015547 NA coding downstream 415505 11354071 ~ 11356899 (+)
AMCG00015545 LOC105903120,LOC108434861,LOC107588129,LOC107753955,LOC107659720,LOC108267459,LOC106577530 coding downstream 428247 11366813 ~ 11370908 (+)
G98422 NA non-coding upstream 103962 10819748 ~ 10820170 (+)
G98398 NA non-coding upstream 215379 10708421 ~ 10708753 (+)
G98338 NA non-coding upstream 352242 10529960 ~ 10571890 (+)
G98312 NA non-coding upstream 427070 10496836 ~ 10497062 (+)
G98311 NA non-coding upstream 429181 10494524 ~ 10494951 (+)
G98442 NA non-coding downstream 50290 10988856 ~ 11019109 (+)
G98569 NA non-coding downstream 528286 11466852 ~ 11468628 (+)
G98590 NA non-coding downstream 608999 11547565 ~ 11547819 (+)
G98625 NA non-coding downstream 1461167 12399733 ~ 12405119 (+)
G98731 NA non-coding downstream 1873910 12812476 ~ 12812692 (+)
G98402 NA other upstream 182999 10735979 ~ 10741133 (+)
G98302 NA other upstream 473469 10448166 ~ 10450663 (+)
AMCG00015504 NA other upstream 505432 10411887 ~ 10418700 (+)
G98251 NA other upstream 606807 10316908 ~ 10317325 (+)
AMCG00015492 NA other upstream 701636 10213001 ~ 10222496 (+)
AMCG00015539 NA other downstream 120924 11059490 ~ 11066855 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other downstream 419586 11358152 ~ 11416599 (+)
AMCG00015555 NA other downstream 1495600 12434166 ~ 12462665 (+)
G98759 NA other downstream 2037073 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 2485314 13423880 ~ 13429300 (+)

Expression


Co-expression Network