G98569


Basic Information

Item Value
gene id G98569
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 11466852 ~ 11468628 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU122970
AAAAAAATCGACAGCTTTCAAATCCTTTCTTCTATTTCTCTTTGCGCCAACAAATGCGTGTGTATATTGTATGTGGGAGGCTTGTACAAGctgctaaaaaacaaaatacatataactgAGTTAATATTTACAGATTGGTCTGAAGTGGATTTGGCGTGCTTTCCTGCCAAGATTATCTGGCATCGACTTGTGAAGGATTTGGGCCGCATTCCCAAGGAAATTGATCACGGAGAAACTTCAATTTCAGATTGGCATTTTCTTTCAAAGCGCAAACTCTCACCTTCACCAGAACAGCTAGGCTGGTTGTAAAGGTTGGTAAAAGATTTACTCAGGACTGAGCACATAAGTTTTAATACgatttttcatatgtttttgcagttgttttttcccctgaaTTAATAGACCGTATAGGGGCTGACTGTgtgaatatatcatatattgTTACAGCAACTGCAATATGCATATTGGCCTTTATAGATAGTTTTGCCTATTTTAGACTTATTCTTGGCTGTCCCTCTCTACGTTTACAGCTGTAATTAGTGTTAATCCTGGTCTACTTCTCAGTTAAATGTGATGACAAATCACACGTTTTTCGTAATTGCTTtccattaaaatgacaatgctTTCTAACTACCCCTATCTATTGGAGGTGTTTGAGTCAAACAGACAGAACCGCTTTGTCTGCTGTGTGGACGCTGTAGCCATAGGGACTCGCGTCTTGGGCTTGAAATGGTCCAATGGTCCACCAATGAGTCCAAGCTATTTAGTGAcctatattaaaaatgaattggagGGAATTTGATGActgatataagaacataagaaagtttacaattcgagaggaggccattcgacccatcatgcttgtctggtgtccattaataaccaagtgatccaaagaccctatccagtctatttttaaatgttcccaaattttcagcatctaccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttccgttttgaatgccttgaagcccaatttccatctgtgtccccgggtgcgtgtgtccctgctgatttggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtcatACACTTCCTATTTCCTGAAATCTGCACGTGATGCTGATTTATGCCCCCCTGCTTGGGGAGGGGGTGGACAACAAATGCTAGTAGGCTACTTTAGGATCAAATTTTAGTCATCCAATTatttacacagacacagtctGACAGAGCAATGCAAGTCAATTGCCTCCTATTTATTCATGGTTTTAATCTGTTCTGGCCCAATGTGttggatttgttttctcatgCTTTTGGCAAACCCTTCATGGCTTTGCCATTCTGGATTTTGAGGCTGGTGTAATTGCTGTGAACACATACAGTAAATATGATCCCTGCCGTAGGCCTACAACCGAACATCTTGCAGCCACAGTGAAATCCAGGGCAAAACCAGGTGTGATTTTGATTGTGTATCAGTCGTGAAATCCAGGGTCAATACCTGTAGCGAATGTGTATAAAACACCTTAAGCACTGACAGACGCGCACTGGGATTTCTGTGTCTGTGGAGTCCTGGGGGGAAAGAATCTGTACACAACAGGGTGTTGATGTTTGAGAGCCAAACAATCACCAAAAAAATACCAGAGCCAGGGTGCTGTCAGTATTAGTTGTGTCTTCTAAGAGTTTGTGGAGCAGCAGACTGTGCTACCTGGCTGTTGTGTTGTCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122970 True 1777 lncRNA 0.42 1 11466852 11468628

Neighbor

gene id symbol gene type direction distance location
AMCG00015548 NA coding upstream 971 11442221 ~ 11465881 (+)
AMCG00015542 NA coding upstream 52334 11393516 ~ 11414518 (+)
AMCG00015543 sf1,LOC102786152,LOC106577532 coding upstream 74260 11376597 ~ 11392592 (+)
AMCG00015545 LOC105903120,LOC108434861,LOC107588129,LOC107753955,LOC107659720,LOC108267459,LOC106577530 coding upstream 95944 11366813 ~ 11370908 (+)
AMCG00015547 NA coding upstream 109953 11354071 ~ 11356899 (+)
AMCG00015549 NA coding downstream 213663 11682291 ~ 11684136 (+)
AMCG00015550 nrxn2,LOC106935608 coding downstream 472858 11941486 ~ 11944469 (+)
AMCG00015551 LOC106608688 coding downstream 525554 11994182 ~ 11998221 (+)
AMCG00015552 LOC106532321,LOC106577539 coding downstream 587586 12056214 ~ 12058714 (+)
AMCG00015553 LOC107572116 coding downstream 771908 12240536 ~ 12244228 (+)
G98442 NA non-coding upstream 447743 10988856 ~ 11019109 (+)
G98430 NA non-coding upstream 528286 10924132 ~ 10938566 (+)
G98422 NA non-coding upstream 646682 10819748 ~ 10820170 (+)
G98398 NA non-coding upstream 758099 10708421 ~ 10708753 (+)
G98338 NA non-coding upstream 894962 10529960 ~ 10571890 (+)
G98590 NA non-coding downstream 78937 11547565 ~ 11547819 (+)
G98625 NA non-coding downstream 931105 12399733 ~ 12405119 (+)
G98731 NA non-coding downstream 1343848 12812476 ~ 12812692 (+)
G98831 LOC100846954 non-coding downstream 1745242 13213870 ~ 13214646 (+)
G98838 NA non-coding downstream 1788471 13257099 ~ 13259347 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 50253 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 239031 10872670 ~ 11227821 (+)
AMCG00015539 NA other upstream 399997 11059490 ~ 11066855 (+)
G98402 NA other upstream 725719 10735979 ~ 10741133 (+)
G98302 NA other upstream 1016189 10448166 ~ 10450663 (+)
AMCG00015555 NA other downstream 965538 12434166 ~ 12462665 (+)
G98759 NA other downstream 1507011 12975639 ~ 13046813 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 1955252 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 1964423 13433051 ~ 13437147 (+)
G98884 NA other downstream 1976897 13445525 ~ 13447279 (+)

Expression


Co-expression Network