G98876


Basic Information

Item Value
gene id G98876
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13387076 ~ 13391419 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU123353
CTGTGCAATAACTTCAGGATGCGAAGCACAAGAACAGGAACTttgcacataaaacaaaaacaaaacaaaaaacttgccAGTAAAACTAGGCTTTaagtaaaccaaaaaaacaaaacacaaaaataatacagctaACTCCAGGCTTATGCCATTAAGACAGTTGAACAGCTACCATAAGCTTGCTTTGCTTATTTAATACAGTGGCTGAGAGCAGCCATTACCTAACACAGGCTTCAACAAAACAGAACTGACTACAGGTTGAGATAAGGCCTATTTTATCCCCTTCCTGTAGCCCCTCCCGATAGGACCGGTCcactttcataaaaatacaggTGAGGCTAAATGTTCTATAACCTTAATTCTTATGCATAAACTTTTAGTTCCAGATtagtaaattacaaaaaaaaaaaacatttctgtatgacatgacaagaaaaagaaacaaactattGTCATACATCTATATATGAATGGTTGCATTAAGGAGAAATTGCCATTGCACTCGGTATCCCCTGCTCCTGCATGTATGGTCCTGAACACTGTCTGAAAGCAACCAGTGTCGCTCCCGGGCCCTAGGAGCGAACACAGCGAAACTCAAACCCTGAAGTAATGAGCTCTGCTGCAACCCTAAGTGTTTACCTTTCCTAAAcagataagaaaacaaaaaggcattacaaaaaaaacagagagcTTAAAAGATTCACAAAGCGCACGTATAAGCACATAGAAAGTGTCTTTTCCAGTCTTTCACCAAGATTGAATGTCTGGTGTGTTTACCCACATGACTTTACATGGAAGCTCCACGGGTGCTATTTGCGCAAGGTAAGGATCTTGAGTGGTTTATGTTAAAGTGAAATCTCAATTCTGCGGCAATGTCTAGCATCAAATGACAGTGTGAGTTTAATGCATCGCCATCAGTGTGCGGTTGTTGTCATGCAAAACACTAATGTTTGTGATGAGATCTGGACAAACACATCATCACAGTTTacaatattatcatttttttaattagttacttatggcgctaatttgagcccatttATAAAGCCCTAGAAACCCAGGAGCTTCTGAATTGGAAACACAGAAAATCTCTCTAGACTTATTGCACTCTTTTATTCTTGATATTGGGACGGTGCCCCTTGTGACTATCGATACCCATACAGAACACTAATTTACAGGGTCGTATTGAAAATCCTAAACTCACTCTTATCCTGCACTGCACTGGCACCAAAGCCCAGGACACTGAAGCCACCATCCTGCCGACTACACCAACTGAAGAGTCGTacaaatccagagagagatatatatttccaatcaaaaggtttttattacaagcagctgcaaggaagaggttcaagaggcaatctcgagaacagtcttagagaagttacaaactacaggcacttttatgcagaccagacaggagagaaagataacagccCCACGTCTGTCCCGTGGTGGCAGGCACAAACCTAACTTGCACTCAACTCATTAGGAAAACCCACATATGGTTAAACTGGGGAAAAtgtaaggcatatgtaatgtttaattcaCGGAGCCCTGGATCAGAATTGGATAGATGGTGGAGGCCTACTGACAAGATGCATCTTTGAGAATCTCTTTAGATGCATCTCCCGGTACCAGAGTCTTTGTATGGAATTGCTTTGCTCACCCCtatgttttaaatctttaaaactgCACTCTTAATGTAATGGTATTTCACTCCTGCTTCCACACAGTTTTATTTCCTTATACCAGCTCGCACATTCTCCCTGTGGGTTTTCACTGGGTGCTCTGCTTTCCTTACACATCTCAAACGCATGCCTTTTAGGCAGACTGGATTCTCtaaattgttgtgtgtgtgtgtgtctgtgtgtctgtattgccCTACAATGGACTGCTGCCCCATCCAGAGTGtatcctgccttgcaccctgtCTGCTGGCTCCAGCTCCCCATAGCCCTGTACTGGAAGAAACAGTTCACCTTACACCTAATTTGGCTGATGGAAACACTGAGGTACATCCTCCGACTCGGAATCCAACCTGGTGTTCTAGTGTAAAAGGGGCTAGAGACAAAGCCAGCTCACAGCTCTCTTTTATGATAAagtcaaaatacaaacaactaTGGCACCAATCTTTACATCTCTATTGGAACAATCCCTACGGTGTACTGTAACAGGTCAACTCAATTGTGGTATAATTTGATTATAACAACTATTTGCATGTACTATCATCTATAGATGAGCATTTTACTGTAGTACTTGTACTACAGCCCCCTACAGTAACAAGTAATGCACTGCACTTTAACTGCAGATCCCAATTGTCACAGGAGTATTAAGTTGTACTGTTCTAGTTGGGGGATGTAGTAAAAGGTCTGTTCTAGTGtgtgttgaatgtttttatatagCCACAATATTGCAGTGATTCAGTCTGAAATGGTTAAAGAGTAGGATTGCCGAACACAAGTCaagtattgttttgtaaaagctGAACAATTGCACTACCTGGAAGaaaatgtgggggggggggattatcAGTGTGAGCAATCAACCGTGAGCATTCCAACACAATTACATATGGTCAGAAATggcaaacataaaaaaggacTATCACTCAAAGTATAACTAACAAATCCAATAGCAAGTTATATAAACAGAATCTTTACTTCGGACGCATCTAGTGGTTGCAGGACCTCTCCATTCTCCCCTCTGTGGGTTCTATGGTGTCTTTTTAGATAGGCAGAGGTAGTGAAACGCATACCACACAGGGTGCACCAGAACGGTCTCTCACCAGTATGAATGCGGTGGTGTAATTTAAGGCCCGACGGTCTTAGGAAACCCTTCCCACACAGCGTGCAGCAGTATGGCCTCTCCCCTGTGTGAATCACCTGGTGTATTTTAAGTTTGCCTGAAGTTGTAAAATTCTTCTCACACTGGGCACAGGAATGTAATCTCTTGACACGGTgcattttttcttgtgtgtgacTCTGCTCGTGCCTTTTAAGAGCGTAGGCTTGACAGAAGCTCTTCCCGCACTGGGTGCATaagtacggtctctctcctgtgtgacgTCTCTGGTGTATTTTAAGGGTATATTTCGAggtgaaactcttcccacactggtcGCAGGACACTGGTCTTTCGCCTGTATGACTCTGCATGTGCTTTTTCAGAATGTGGGCCTGcctgaaactcttcccacactggacacattGGTAAGGTCTCTCTCCCGTGTGAATGCTCTGGTGGATTCTAGCAACATATGCCGTGGTGAAAGTCTTCCTGCACTGCAAGCAGTGATTGTTGTCCTGAGAATTTCCACTAGACTTTGCCGTGTTCGTACTTGCGGGTGGTAGAGGGAGGGGGCTGGAGGTCCCAGGCTGCTGTTGCTGTATATCCTCTACAGTAGAACAGGAGCTCAGAATCTCCACTGGCTCCTTTGGGGGTTTCTTCTCGATCTTCAATCCTTGCTGTCCTTCGGTTGTTTCCGATTCATCTTGGTGCTGATCCTGCTGGGCATGACTTGCCTCAGCTCTGCACTCTGCATTGGGTGCACACTGCAGCTTGGCCTCCTCTTTGACCTTGCCATAGTCAGTTACCTCAGGGTTTATGCAATGGGATCCTATATTATGAATAGCATCCTCCTCTTTAATGTGAAAAGGGAGCAGTGAACTATAAGTCCCAAGTTGGTGTACAGAGATTTTCTTCAATCTAACGGAGCAGGGCCTCAGAATATGCTCAGTATTGTTGCTCCTCTTCGGCTCTCCGCTCTCCCAGTCCCCTCTGTATGGCTCCTGCTGGGAGTGACCACTGGAGCCCCACTGTGCCTCACAGGGCTGCTGCTCAACAGGAAT

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU123353 True 3854 lncRNA 0.44 2 13387076 13391419

Neighbor

gene id symbol gene type direction distance location
AMCG00015588 NA coding upstream 20946 13351516 ~ 13366130 (+)
AMCG00015590 NA coding upstream 49642 13329582 ~ 13337434 (+)
AMCG00015585 NA coding upstream 130923 13251013 ~ 13256153 (+)
AMCG00015587 NA coding upstream 144185 13240191 ~ 13242891 (+)
AMCG00015583 NA coding upstream 215103 13168657 ~ 13171973 (+)
AMCG00015597 NA coding downstream 110224 13501643 ~ 13516584 (+)
AMCG00015600 NA coding downstream 206867 13598286 ~ 13607255 (+)
AMCG00015607 NA coding downstream 297671 13689090 ~ 13716822 (+)
AMCG00015609 NA coding downstream 411062 13802481 ~ 13821972 (+)
AMCG00015610 LOC100701608,LOC103356189,LOC108412483,LOC103470774,LOC103146641,LOC102233014 coding downstream 441176 13832595 ~ 13834746 (+)
G98843 NA non-coding upstream 124244 13260995 ~ 13262832 (+)
G98838 NA non-coding upstream 127729 13257099 ~ 13259347 (+)
G98831 LOC100846954 non-coding upstream 172430 13213870 ~ 13214646 (+)
G98731 NA non-coding upstream 574384 12812476 ~ 12812692 (+)
G98625 NA non-coding upstream 981957 12399733 ~ 12405119 (+)
G98888 NA non-coding downstream 62468 13453887 ~ 13454126 (+)
G98881 timm10,LOC107746912,LOC107674252,LOC107556822 non-coding downstream 66710 13458129 ~ 13459786 (+)
G98889 NA non-coding downstream 102363 13493782 ~ 13516429 (+)
G98901 NA non-coding downstream 188305 13579724 ~ 13597715 (+)
G98918 NA non-coding downstream 399623 13791042 ~ 13810939 (+)
G98759 NA other upstream 340263 12975639 ~ 13046813 (+)
AMCG00015555 NA other upstream 924411 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 1970477 11358152 ~ 11416599 (+)
AMCG00015528 NA other upstream 2159255 10872670 ~ 11227821 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other downstream 32461 13423880 ~ 13429300 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other downstream 41632 13433051 ~ 13437147 (+)
G98884 NA other downstream 54106 13445525 ~ 13447279 (+)
AMCG00015602 NA other downstream 184777 13576196 ~ 13613292 (+)
AMCG00015608 NA other downstream 490006 13881425 ~ 13884671 (+)

Expression


Co-expression Network