Gene
RNA
| Item | Value |
|---|---|
| gene id | G98881 |
| gene name | timm10,LOC107746912,LOC107674252,LOC107556822 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 13458129 ~ 13459786 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| timm10 | Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to act upstream of or within protein transport. Predicted to be located in membrane and mitochondrion. Predicted to be part of mitochondrial intermembrane space protein transporter complex. Predicted to be active in mitochondrial inner membrane. Is expressed in several structures, including alar plate midbrain region; digestive system; eye; optic tectum; and pectoral fin bud. Orthologous to human TIMM10 (translocase of inner mitochondrial membrane 10). |
| description |
|---|
| mitochondrial import inner membrane translocase subunit Tim10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU123361 | True | 906 | lncRNA | 0.51 | 2 | 13458129 | 13459786 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015588 | NA | coding | upstream | 91999 | 13351516 ~ 13366130 (+) |
| AMCG00015590 | NA | coding | upstream | 120695 | 13329582 ~ 13337434 (+) |
| AMCG00015585 | NA | coding | upstream | 201976 | 13251013 ~ 13256153 (+) |
| AMCG00015587 | NA | coding | upstream | 215238 | 13240191 ~ 13242891 (+) |
| AMCG00015583 | NA | coding | upstream | 286156 | 13168657 ~ 13171973 (+) |
| AMCG00015597 | NA | coding | downstream | 41857 | 13501643 ~ 13516584 (+) |
| AMCG00015600 | NA | coding | downstream | 138500 | 13598286 ~ 13607255 (+) |
| AMCG00015607 | NA | coding | downstream | 229304 | 13689090 ~ 13716822 (+) |
| AMCG00015609 | NA | coding | downstream | 342695 | 13802481 ~ 13821972 (+) |
| AMCG00015610 | LOC100701608,LOC103356189,LOC108412483,LOC103470774,LOC103146641,LOC102233014 | coding | downstream | 372809 | 13832595 ~ 13834746 (+) |
| G98888 | NA | non-coding | upstream | 4003 | 13453887 ~ 13454126 (+) |
| G98876 | NA | non-coding | upstream | 66710 | 13387076 ~ 13391419 (+) |
| G98843 | NA | non-coding | upstream | 195297 | 13260995 ~ 13262832 (+) |
| G98838 | NA | non-coding | upstream | 198782 | 13257099 ~ 13259347 (+) |
| G98831 | LOC100846954 | non-coding | upstream | 243483 | 13213870 ~ 13214646 (+) |
| G98889 | NA | non-coding | downstream | 33996 | 13493782 ~ 13516429 (+) |
| G98901 | NA | non-coding | downstream | 119938 | 13579724 ~ 13597715 (+) |
| G98918 | NA | non-coding | downstream | 331256 | 13791042 ~ 13810939 (+) |
| G99053 | NA | non-coding | downstream | 457809 | 13917595 ~ 13918028 (+) |
| G99056 | NA | non-coding | downstream | 465462 | 13925248 ~ 13933503 (+) |
| G98884 | NA | other | upstream | 10850 | 13445525 ~ 13447279 (+) |
| AMCG00015591 | LOC101069382,LOC104961169,LOC107581227 | other | upstream | 20982 | 13433051 ~ 13437147 (+) |
| G98878 | LOC101159514,LOC106941902,LOC105028768 | other | upstream | 28829 | 13423880 ~ 13429300 (+) |
| G98759 | NA | other | upstream | 411316 | 12975639 ~ 13046813 (+) |
| AMCG00015555 | NA | other | upstream | 995464 | 12434166 ~ 12462665 (+) |
| AMCG00015602 | NA | other | downstream | 116410 | 13576196 ~ 13613292 (+) |
| AMCG00015608 | NA | other | downstream | 421639 | 13881425 ~ 13884671 (+) |
| G99074 | aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 | other | downstream | 637159 | 14096945 ~ 14100855 (+) |
| AMCG00015657 | NA | other | downstream | 1589137 | 15048923 ~ 15200978 (+) |
| G99475 | NA | other | downstream | 1854250 | 15314036 ~ 15314414 (+) |
