G98884


Basic Information

Item Value
gene id G98884
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13445525 ~ 13447279 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU123364
caGTGTCAGTCCAGTGATGGCGAACAGCAGCTCCAGTCCACTGTATATGAAGGCAGGACAGAGGAATCTCAGCCTATAGTCTCTCAGGTGTTTGAATGGCAGCTGGAAGATGTTCCCCCAGCCAATACTGCGCAGGTCTATCTCCTCTGTGGGCCGATAGGCTGAGCCACACAGGGCCAGGAacAACCATGGCAATGAAGGCCCCGCCCATGAGAACGCTCTCCACCACGATAAGCTCGAGGCTCCGCGGCAACTTGTACAACACGGTTCTGTTGAGGCCTGTCAGCACACCCACACTGGTcgcccctgagagagagagagagggagagagagagagggttattGCAGGAGTAGAGCACAGACATTCACcgatagacacacacagacacaggcacatagacacacagagacacacccacacacaccgtACCGCACTGCTTGACGTTGAATAGCGTGTGGTTGTGAGAGTACAAGTACTTGTCGAGGAAGAAGACCATCGGGAACTCGGCAAAGACAAAACTGAGCTGAAAACACAGGTTCAAGATAGAGTGAATATACATGCACAGTTGATGCAGAGGGTCAATACACTCACACGGTCAAAATGTTCACGAATCAAAAGTCAGTGTTCGTTGTGTCGATATGGAGATTCAGTACACGCAGTCGATATActgtggctataggaagtattgaCCCCCCCTTGGAGTTTTCAAATTGTGTAATAGTCAAGATAGAGGGTCGATATCCCAAAAAGTTGCTAAAGAAAGTCAAAACAGTCAATGTAGAGACTCAATGTGCAGTCTTATGCACTGACTGGCTGATACCCTGGTGGGTGGGCGGGGCTAACTCACATGAAAGACAGAGTAGAAGATTGATTGGAAAATGATGATGTAACGGTGACATGCCCCCTTGGGAGCCTTCTTCTGCTCCTGCACATGCTCTTCCTTATAGTTGTCAAACTCATAGTACTGCTGGGCCATCCTGGCACACAGAGACAGTACAGCAAAGCACATTAGAACTGCACTGGCAATACGGCACATTAACTGAGAATAACATTATATGAGAATACAGCACACTTCAGTTCTTCCCAATTGCTAAAGCCAAATTCCCGAACCTGAGCTagagacagtacagtacattaacactgcactgagacagaCTGTACAATagagcacattaacactgcactgagagagaaacacagtaCACTGCAggacattaacactgcactgaaaacgcactgattgactgatacactaataaaatgactgactgactgactgacgcacCGACTGACCGCTGCACTGACTGAATGATTGAATTAAAAGCTTAAGAGAGGAACTTTGACCCCAGGGTGAACCCCAGACAGCTGACCTGGTGATGTAGTTTCCTAGCGATGCCCAAAGTGGCACGATGGCTGCACCAATGGCCACAGCCGATGGGACCAGGGTATAGTATCGCTCCCAGTAATTGGTCGACACGAAAAGGGCATAGATTCCTGAGGCCAGGAACATCATCCACTTAGTCCCAAGAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123364 True 1533 TUCP 0.48 2 13445525 13447279

Neighbor

gene id symbol gene type direction distance location
AMCG00015588 NA coding upstream 79395 13351516 ~ 13366130 (+)
AMCG00015590 NA coding upstream 108091 13329582 ~ 13337434 (+)
AMCG00015585 NA coding upstream 189372 13251013 ~ 13256153 (+)
AMCG00015587 NA coding upstream 202634 13240191 ~ 13242891 (+)
AMCG00015583 NA coding upstream 273552 13168657 ~ 13171973 (+)
AMCG00015597 NA coding downstream 54364 13501643 ~ 13516584 (+)
AMCG00015600 NA coding downstream 151007 13598286 ~ 13607255 (+)
AMCG00015607 NA coding downstream 241811 13689090 ~ 13716822 (+)
AMCG00015609 NA coding downstream 355202 13802481 ~ 13821972 (+)
AMCG00015610 LOC100701608,LOC103356189,LOC108412483,LOC103470774,LOC103146641,LOC102233014 coding downstream 385316 13832595 ~ 13834746 (+)
G98876 NA non-coding upstream 54106 13387076 ~ 13391419 (+)
G98843 NA non-coding upstream 182693 13260995 ~ 13262832 (+)
G98838 NA non-coding upstream 186178 13257099 ~ 13259347 (+)
G98831 LOC100846954 non-coding upstream 230879 13213870 ~ 13214646 (+)
G98731 NA non-coding upstream 632833 12812476 ~ 12812692 (+)
G98888 NA non-coding downstream 6608 13453887 ~ 13454126 (+)
G98881 timm10,LOC107746912,LOC107674252,LOC107556822 non-coding downstream 10850 13458129 ~ 13459786 (+)
G98889 NA non-coding downstream 46503 13493782 ~ 13516429 (+)
G98901 NA non-coding downstream 132445 13579724 ~ 13597715 (+)
G98918 NA non-coding downstream 343763 13791042 ~ 13810939 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 8378 13433051 ~ 13437147 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other upstream 16225 13423880 ~ 13429300 (+)
G98759 NA other upstream 398712 12975639 ~ 13046813 (+)
AMCG00015555 NA other upstream 982860 12434166 ~ 12462665 (+)
AMCG00015544 LOC105903120,LOC107562780,LOC108434861,LOC107691965,LOC106577530,LOC107742298 other upstream 2028926 11358152 ~ 11416599 (+)
AMCG00015602 NA other downstream 128917 13576196 ~ 13613292 (+)
AMCG00015608 NA other downstream 434146 13881425 ~ 13884671 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other downstream 649666 14096945 ~ 14100855 (+)
AMCG00015657 NA other downstream 1601644 15048923 ~ 15200978 (+)
G99475 NA other downstream 1866757 15314036 ~ 15314414 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1587643 NA non-coding NC_048583.1 CM023237.2 8515794 ~ 8516255 (+)