G99074 (aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942)


Basic Information

Item Value
gene id G99074
gene name aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14096945 ~ 14100855 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU123659
TCAGGTGCAAGAGAACTGCCCAATTTTATTTCTCAAAGTCATTTTTCCCCAGTAGTGCAGACTGCAACAAGGGTACTCAATAACTATTGCAATCCCAGAGCAGCTCTTCCCAGAGGAGATTCAGTCCAGATGGGGCAGTCTGTGCAGTGTATCTAGGGACAGTGTGCAGGGTGTCCATGCAGACTGACAGAGACAGGAATCAATGGGTCTCCGTGCATCTAAACTGACAGGATTAAATGCCAGGTCATCCACTAGACAACTGTCCCGACATGCTATCCGTGGAGACTGTAGCATCTTGTGTAGAGGGACAGTGTATCTAAAGCACTGCACAAACTGTATGAAGTGAAGTGTCAGCTGGAATCAGCTGTGTGGAGATGGAACAATCTCCTCTCTATTAGCGGGACTGGCTGTGTATTAGTGTACGGTAGCTGCATTTGGCTTCGTGGGGACGGTCTTCCTTTCTTCCTCCCTCTTAGAGGTCTAGTAGACGTAGCTGGCGCTGAAGAGAGACTGGGTGGCGGACTGGTCCGTCTGGCCACTGGGCTTGTACTCCCCCTTGGACGCCAGGCCGTTGCTTGGCCCGGGTGGAGAAGGTGGTCTGAGCAGCCTTGGTGTTTCCTGGCTTGCCCTGCCAGGTGGCAAGGGTGGAGGCCTGCAGGGCGCGGCCATAGGAGAAGGTGAGCTTCCAAGGCCGAGGTAGGGGGCACTGGTTGATGGCGTTCAGGTTCAGCGACGCCTCCTCCTCACTCTGCCCCCCCGACAGGAAACAGATACCTGCAGCAGCTGGCACAGTACGGCGCAGGGCAGTGACTGTTGCCATGGCGACCTCCTGGGGGGTGTACTTCTGGGAGCAGGCTTGGCCGGCTGTCACCATGTTGGGCTTCAGCAGGGTGCCCTCCAGATACACATGGTGATCAGACAGGGCCTTGTACACTGCAGACAGcacctagagagagagagagttaatacagtacagacacactgactgactggacactacagcacagagcagtgttAATGAGCAAGAGGGCATTAATGCAGTACCATGCAGAGTGGCGACTCACCTTCTCAGTGGCATACTGGCAGCGCTGCAGGTTGTGGTCTCCGTCAGTAAGGATCTCCGGCTCCACAATTGGCACCAAGCcattctgagagagagagacggagctATTTAACAATTTCATTCCTTTTTACTGTAATGCATTGGGAACACTTCTGaaacttgtcatgccaataacaCTTATTTTGAATGAGATTAGAGCACAATTAGTCTTGCATATACCTTACTCTTCTTAGTCttcccaccacccccaccaacCGCATCCatccacctccctctctcctccaccccTCCCTGCACCTCTATCCCACTCCCCCTCTCTGACCTGCTGACAGATGCTGGCGTATCTTGCCAGCACATTGGCATTCTCTGCAattgagagagaagaggggcaGCAGTCACTGATCTTCAGCACACAGCGCCACTTGGCAAAGTCAGCACCATCCTTCTTGTACTGGGCACAGCGCTCCCCCAGACCATCcagccCCTGTGTCGTCGTCTCCCCATCTGTTCCAGCCAGAGCTGCTGTCCCTTTGTCCACCTTGATGCCCACTACGATGCCAGCGTCCTTGATGATTTTTGGGAACAGCACCCCCGTGTCGCTCTTCTGGTACAGCGTCTCGTGGAATAGGATGACCCCACCGATGGAGTTGGACAGCgcagggtcagaggtcagcagCAGCTGGCGGAACTGCCGCCGATGCTCCTCTGTGTTTTCAACGTTGATCTTCTGCAGCCTCTTCCCCATcgtccctgagagagagagagagagagagagagagagagagagagagaaaagtaaaTATAGCAGACAGTACACAATTGCGCCATCTCTTCCTCAGTTTCTCCGCTCCCTCCATTTTAAC
>TU123660
TCAGGTGCAAGAGAACTGCCCAATTTTATTTCTCAAAGTCATTTTTCCCCAGTAGTGCAGACTGCAACAAGGGTACTCAATAACTATTGCAATCCCAGAGCAGCTCTTCCCAGAGGAGATTCAGTCCAGATGGGGCAGTCTGTGCAGTGTATCTAGGGACAGTGTGCAGGGTGTCCATGCAGACTGACAGAGACAGGAATCAATGGGTCTCCGTGCATCTAAACTGACAGGATTAAATGCCAGGTCATCCACTAGACAACTGTCCCGACATGCTATCCGTGGAGACTGTAGCATCTTGTGTAGAGGGACAGTGTATCTAAAGCACTGCACAAACTGTATGAAGTGAAGTGTCAGCTGGAATCAGCTGTGTGGAGATGGAACAATCTCCTCTCTATTAGCGGGACTGGCTGTGTATTAGTGTACGGTAGCTGCATTTGGCTTCGTGGGGACGGTCTTCCTTTCTTCCTCCCTCTTAGAGGTCTAGTAGACGTAGCTGGCGCTGAAGAGAGACTGGGTGGCGGACTGGTCCGTCTGGCCACTGGGCTTGTACTCCCCCTTGGACGCCAGGCCGTTGCTTGGCCCGGGTGGAGAAGGTGGTCTGAGCAGCCTTGGTGTTTCCTGGCTTGCCCTGCCAGGTGGCAAGGGTGGAGGCCTGCAGGGCGCGGCCATAGGAGAAGGTGAGCTTCCAAGGCCGAGGTAGGGGGCACTGGTTGATGGCGTTCAGGTTCAGCGACGCCTCCTCCTCACTCTGCCCCCCCGACAGGAAACAGATACCTGAGAGAGCGAGCAATCAGCCGCAAGAAATTCAGACATGCACAGCCTTCTCCCTCCTGCCCCATCAtgc
>TU123661
TCAGGTGCAAGAGAACTGCCCAATTTTATTTCTCAAAGTCATTTTTCCCCAGTAGTGCAGACTGCAACAAGGGTACTCAATAACTATTGCAATCCCAGAGCAGCTCTTCCCAGAGGAGATTCAGTCCAGATGGGGCAGTCTGTGCAGTGTATCTAGGGACAGTGTGCAGGGTGTCCATGCAGACTGACAGAGACAGGAATCAATGGGTCTCCGTGCATCTAAACTGACAGGATTAAATGCCAGGTCATCCACTAGACAACTGTCCCGACATGCTATCCGTGGAGACTGTAGCATCTTGTGTAGAGGGACAGTGTATCTAAAGCACTGCACAAACTGTATGAAGTGAAGTGTCAGCTGGAATCAGCTGTGTGGAGATGGAACAATCTCCTCTCTATTAGCGGGACTGGCTGTGTATTAGTGTACGGTAGCTGCATTTGGCTTCGTGGGGACGGTCTTCCTTTCTTCCTCCCTCTTAGAGGTCTAGTAGACGTAGCTGGCGCTGAAGAGAGACTGGGTGGCGGACTGGTCCGTCTGGCCACTGGGCTTGTACTCCCCCTTGGACGCCAGGCCGTTGCTTGGCCCGGGTGGAGAAGGTGGTCTGAGCAGCCTTGGTGTTTCCTGGCTTGCCCTGCCAGGTGGCAAGGGTGGAGGCCTGCAGGGCGCGGCCATAGGAGAAGGTGAGCTTCCAAGGCCGAGGTAGGGGGCACTGGTTGATGGCGTTCAGGTTCAGCGACGCCTCCTCCTCACTCTGCCCCCCGGGCACAGCAGCTGGCACAGTACGGCGCAGGGCAGTGACTGTTGCCATGGCGACCTCCTGGGGGGTGTACTTCTGGGAGCAGGCTTGGCCGGCTGTCACCATGTTGGGCTTCAGCAGGGTGCCCTCCAGATACACATGGTGATCAGACAGGGCCTTGTACACTGCAGACAGcacctagagagagagagagttaatacagtacagacacactgactgactggacactacagcacagagcagtgttAATGAGCAAGAGGGCATTAATGCAGTACCATGCAGAGTGGCGACTCACCTTCTCAGTGGCATACTGGCAGCGCTGCAGGTTGTGGTCTCCGTCAGTAAGGATCTCCGGCTCCACAATTGGCACCAAGCcattctgagagagagagacggagctATTTAACAATTTCATTCCTTTTTACTGTAATGCATTGGGAACACTTCTGaaacttgtcatgccaataacaCTTATTTTGAATGAGATTAGAGCACAATTAGTCTTGCATATACCTTACTCTTCTTAGTCttcccaccacccccaccaacCGCATCCatccacctccctctctcctccaccccTCCCTGCACCTCTATCCCACTCCCCCTCTCTGACCTGCTGACAGATGCTGGCGTATCTTGCCAGCACATTGGCATTCTCTGCAattgagagagaagaggggcaGCAGTCACTGATCTTCAGCACACAGCGCCACTTGGCAAAGTCAGCACCATCCTTCTTGTACTGGGCACAGCGCTCCCCCAGACCATCcagccctgagagagagcaagagaaagagttaatacagtacagacacactgactcac

Function

symbol description
aldob Predicted to enable fructose-1-phosphate aldolase activity and fructose-bisphosphate aldolase activity. Predicted to be involved in fructose 1,6-bisphosphate metabolic process and glycolytic process. Predicted to be located in cytoplasm and microtubule organizing center. Predicted to be active in cytosol. Is expressed in several structures, including EVL; alar plate midbrain region; digestive system; intestinal bulb primordium; and midbrain. Human ortholog(s) of this gene implicated in hereditary fructose intolerance syndrome and type 2 diabetes mellitus. Orthologous to human ALDOB (aldolase, fructose-bisphosphate B).

NR:

description
PREDICTED: fructose-bisphosphate aldolase B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123659 True 1926 TUCP 0.54 6 14096945 14100855
TU123660 False 844 lncRNA 0.54 2 14096945 14097938
TU123661 False 1582 lncRNA 0.53 4 14096945 14099137

Neighbor

gene id symbol gene type direction distance location
AMCG00015617 NA coding upstream 678 14089967 ~ 14096267 (+)
AMCG00015616 NA coding upstream 103856 13985543 ~ 13993089 (+)
AMCG00015610 LOC100701608,LOC103356189,LOC108412483,LOC103470774,LOC103146641,LOC102233014 coding upstream 262199 13832595 ~ 13834746 (+)
AMCG00015609 NA coding upstream 274973 13802481 ~ 13821972 (+)
AMCG00015607 NA coding upstream 380123 13689090 ~ 13716822 (+)
AMCG00015618 NA coding downstream 3473 14104328 ~ 14112925 (+)
AMCG00015619 NA coding downstream 40267 14141122 ~ 14146970 (+)
AMCG00015625 NA coding downstream 120741 14221596 ~ 14234664 (+)
AMCG00015629 ndufs8,ndufs8a,LOC107679876,LOC107746464,LOC107674223 coding downstream 352662 14453517 ~ 14456893 (+)
AMCG00015630 NA coding downstream 361805 14462660 ~ 14467684 (+)
G99068 NA non-coding upstream 31807 14051495 ~ 14065138 (+)
G99056 NA non-coding upstream 163442 13925248 ~ 13933503 (+)
G99053 NA non-coding upstream 178917 13917595 ~ 13918028 (+)
G98918 NA non-coding upstream 286006 13791042 ~ 13810939 (+)
G98901 NA non-coding upstream 499230 13579724 ~ 13597715 (+)
G99093 NA non-coding downstream 25766 14126621 ~ 14152625 (+)
G99120 NA non-coding downstream 170526 14271381 ~ 14425466 (+)
G99125 NA non-coding downstream 215545 14316400 ~ 14324233 (+)
G99136 ankrd13d,LOC108424219 non-coding downstream 285278 14386133 ~ 14387285 (+)
G99138 NA non-coding downstream 287565 14388420 ~ 14390665 (+)
AMCG00015608 NA other upstream 212274 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 483653 13576196 ~ 13613292 (+)
G98884 NA other upstream 649666 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 659798 13433051 ~ 13437147 (+)
G98878 LOC101159514,LOC106941902,LOC105028768 other upstream 667645 13423880 ~ 13429300 (+)
AMCG00015657 NA other downstream 948068 15048923 ~ 15200978 (+)
G99475 NA other downstream 1213181 15314036 ~ 15314414 (+)
G99541 NA other downstream 1696095 15796950 ~ 15801634 (+)
G99624 NA other downstream 2030189 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 2332588 16433443 ~ 16457842 (+)

Expression


Co-expression Network