G99120


Basic Information

Item Value
gene id G99120
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14271381 ~ 14425466 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU123727
gtgtccagtcagtcagtgtgtctgtactgtattaaccctctctctctcagtgcacggttaatgtactgtagtgtccagtcagtgtgtctgtactgtattaaccctctctctctcagtgcagtgttaatgtactgtagtgtccagtcagtcagtgtctgtactgtactgtattaaccctctctctctcagtgcagtgttaatgtactgtagtgtccagtcagtcagtgtgtctgtactgtattaaccctctctctctcagtctctccaGTAATGGAACACAGGGTGCTGCAGTTTTCTGTTGCTACTCACAGGTGACCCTGCCCTCCCCTCCAgtcagagagaaacagaaagagagagatggagagagatggagggacagagggagggaggttgggtgggtgggtgggtggaggCACTCCAGGGATCAGCTCCGCTTCAGCCCCACTGACAGCCCCACGATGAGCGCCAGCACGGCCAGTACACACAGCACTATGAGTGTCAGCAGCAGCACCTTCTGCAGGGGAGGAGACACTACTGTACTACTGCATCACTGTCACTATACACCACTGTACTGGATCTATAGGCTCCACTGTATCACTCCACTTGTGCAGGAGCAGACATACACAACAACCACAACCTCCTGCTGGGCCACACGGCATctcagacacacatacacacacagcttctACAGTCTGAGCTGTAGtggtcagacagacagacacagttaGTCTGAggagcacacagacagacagacagtggaaGACATACTAAACAGAGAAAAGCAGAGGAAAGTAGAAAGAAGAACagtgagagagcaagagacaaggagaaaatatgaaaataaaagagaaatagaGGGTGGATGTGCTCCTGGCGGTTTGCGGACCGTTGTTGTGGGTGCTGTCCACAGTGACGGTGATCAGTAACAGGGAAGGTCTCCACACCTATCTCAGCCTGAGTCACCGCTGACCCTGTTTCTCAGCGTGACAGCTCCAGGGCAGCTCTGGTTATTCCAGGGGGGTTTGGGGCAGTTTTTGATGGGCAGATGTTTGGGGAGAGTGTCAGGGCTAGATACGAGGTCATTCCAGGGTGGAAGGTCAGTATATTCCAGTGATTGGGTCCATGTACTGCAAGGAGGGGCTGAGTGTAATCCATGGAGGGGTTCAGAGTTAttcagagaggggggggggggcagtgtatTCCAGGGAGAGGGTCCATGTAATGCAAAGAGGGGGAGATTGTATCTTAGGGAAAGGGCTAGTATAATCCATTGAGGAAGTAAGTGTGTTCAAGGGAGGGGGTCAGTGTATTCCAGGGAGGGTGGAGGCAGGGGATTCCAGGGAGGGGTTCGATGTAATCCAGCGACTCACCCGGCGAGCCTCGCTCTGGAATTTGACAGCTTTCTTAGTGTCAGCCACTGCACGCTCCACGAAGCCCACTGATTGGTCCATATTGCTCTCGATCCTGTCAATCATACCGCCCTGACAGAGAgcggggagggggagggggccggGGCCGGGACCACCAGGattgagcagagagagagggagggacagagaggatGTGATAGAGAAGGAGAGGTatagagacagggagagggagggagaaagagagaggtacagagaaagggagagagagggacaggaagGCACAGAAAGGGAGATTGTGTTAGTGGAGAGAAAGTGGACACAAGTGATAATGGGACTGACACAGATAAGACCGTGTGCTGTACAGGGGGtacagtattgtacagtgtgttgtgtaggGAAAGTACAGTGTGTTGTCCAGTGTTGTGGTGCATTTGTACAGTGTGAGTACAGTACCTTGCGTGCCTTGCTCTGGTATTTGACGGCTTTCTTGGTCTGAGCCTTGGCCACCTCTATATGATCCACTGACTTAGACACCTGAGCTTCTATATTATCTACAATatcaccctgagagagagaaagaggggggggaggggggattaatactgaatgacacactgaatgacacactgaatgacacactgaaTGACACAAGGTGAGTATTGGTGTGTAAGACAGAAGAGCTCTTACCTTGTCTCTGGCTCTCCTCAGAATGCAGTGAGCAGTGAGGGGAGAGGTCAGGGTTAAAAACATTCTTACAAAAATTGCCGAGagagacacccacacacaactAACCGCTAACCCACACACAAGTAACCACCAAACGGACACGCAGAGGGACACGTCCACGGACACGAAGCCCAGAGTGGTCAGTCAGTACCTGGTTCTCCACAAGCATGGCAATGTCCACAAACATGTCGTGCAGCTCTTTGATGCTGCTCTCCAGACGCACAATGTCTTTGTGTCGAGACTCGATCTCATTCAGGGCCTGCTTAGAGATACTGGAATCCACTATCCAGAGGTGAAGATGGCTGGGTTTCCACTCTCCAGcatctcctccagctcctcatCTGTTGTGTTCTTAccagctagagagagagagagagagggttaatatagtatagtacactcacacagactcacTAACTGACTGGTTCACACACTGGCCAGTCCAGTGTGCACTCACTGATCTCCAGCTGTCTCTGGATGCGGCCCTTGCTCCTCTCTCGGAAGTCCACCTGGGCCTCATTGTACTTGGTCATCACCTCCACAAACTTCCTGGACAGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123727 True 2657 lncRNA 0.51 5 14271381 14425466

Neighbor

gene id symbol gene type direction distance location
AMCG00015625 NA coding upstream 36717 14221596 ~ 14234664 (+)
AMCG00015619 NA coding upstream 124411 14141122 ~ 14146970 (+)
AMCG00015618 NA coding upstream 158456 14104328 ~ 14112925 (+)
AMCG00015617 NA coding upstream 175114 14089967 ~ 14096267 (+)
AMCG00015616 NA coding upstream 278292 13985543 ~ 13993089 (+)
AMCG00015629 ndufs8,ndufs8a,LOC107679876,LOC107746464,LOC107674223 coding downstream 28051 14453517 ~ 14456893 (+)
AMCG00015630 NA coding downstream 37194 14462660 ~ 14467684 (+)
AMCG00015636 NA coding downstream 76288 14501754 ~ 14502659 (+)
AMCG00015639 NA coding downstream 96931 14522397 ~ 14538432 (+)
AMCG00015637 ssrp1,LOC108262778 coding downstream 132283 14557749 ~ 14573035 (+)
G99093 NA non-coding upstream 118756 14126621 ~ 14152625 (+)
G99070 NA non-coding upstream 162061 14063929 ~ 14109320 (+)
G99068 NA non-coding upstream 206243 14051495 ~ 14065138 (+)
G99056 NA non-coding upstream 337878 13925248 ~ 13933503 (+)
G99053 NA non-coding upstream 353353 13917595 ~ 13918028 (+)
G99137 ran1,ran,LOC107588340 non-coding downstream 16025 14441491 ~ 14444142 (+)
G99229 NA non-coding downstream 67548 14493014 ~ 14495627 (+)
G99232 NA non-coding downstream 121531 14546997 ~ 14550448 (+)
G99259 NA non-coding downstream 192785 14618251 ~ 14618610 (+)
G99325 NA non-coding downstream 350632 14776098 ~ 14776461 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 170526 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 386710 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 658089 13576196 ~ 13613292 (+)
G98884 NA other upstream 824102 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 834234 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 623457 15048923 ~ 15200978 (+)
G99475 NA other downstream 888570 15314036 ~ 15314414 (+)
G99541 NA other downstream 1371484 15796950 ~ 15801634 (+)
G99624 NA other downstream 1705578 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 2007977 16433443 ~ 16457842 (+)

Expression


Co-expression Network