G99348


Basic Information

Item Value
gene id G99348
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 15052397 ~ 15161865 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU124058
CAGCTCCCCTGATCTCAACACCAACCTGACTCTCCCTCTGGAGACAGAAGGACTCTCTCACTCCTACAGCTGTGTGGCCACCAACCCCGTCAGCACTGAGAGAGTCACAGTCAACACTGAGGACAACTGCACTGGTGCTTTTGCCTTTGAAATGACAAGCGCCCAGTGAGCCGCAGCagccagagacagagagagaggccgaCACACACCCAGACACGCACAGGTCAAACTGCATCTGTATCACCcagactgacacagacacacctcaGGTGAGACTGCGCTCAGTCCAGCTCctcacactgacagagagagagagcgagtgaagACACCACAGCGCCTCTGGACCAAACACTCCCACCAGCATGAGAGGAGCCCCCACTGCAGTctcctgtccctccctctccctctccctctctctccctctctccctctctctctctctcagtgtacaGGAGCAGTCCTGCAGTGCTGAGCTCTCAGTCAGGCTCCAGTGCAGGATGAGCCCCTCCAGCCGCTCAAACTCTGCTGCTCTTCCCCCTCCCTGACCGCTACACAGCACTGGAGACAAGCTGTTCTCATCATCAGCACCTGCACTCTCTACAGAGATTTCCCAAAATGCAACACCTGCACATACAGCTTGGAAACCACAAAGTTGcctgcaatttatattttattctttttccatttcttttgtgCATTATTTCATACTAATAAAGCTGATAGTGATGTATAACTGCTGAGCTCTCTTCAGTCTACAGGAGTCTGTGCAGTGGGTTTCCTGCAGGCTGCCTTTAATCACTGAACATACAAAagttaaaacacaattacaatagggAACAGCGTCACACACGTCCTTGTTAAATTGCACCCTTAAAAGGTATAAAATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124058 True 889 lncRNA 0.51 2 15052397 15161865

Neighbor

gene id symbol gene type direction distance location
AMCG00015650 NA coding upstream 42888 14992880 ~ 15009509 (+)
AMCG00015653 NA coding upstream 83585 14966603 ~ 14968812 (+)
AMCG00015648 NA coding upstream 161454 14830842 ~ 14890943 (+)
AMCG00015646 NA coding upstream 244999 14720074 ~ 14807398 (+)
AMCG00015643 NA coding upstream 435641 14609879 ~ 14616756 (+)
AMCG00015656 NA coding downstream 43725 15205590 ~ 15214257 (+)
AMCG00015661 NA coding downstream 98176 15260041 ~ 15269845 (+)
AMCG00015663 NA coding downstream 151688 15313553 ~ 15348690 (+)
AMCG00015665 NA coding downstream 549327 15711192 ~ 15728592 (+)
AMCG00015668 NA coding downstream 666806 15828671 ~ 15902686 (+)
G99350 NA non-coding upstream 145154 14905607 ~ 14907243 (+)
G99342 NA non-coding upstream 172322 14879756 ~ 14880075 (+)
G99325 NA non-coding upstream 275936 14776098 ~ 14776461 (+)
G99259 NA non-coding upstream 433787 14618251 ~ 14618610 (+)
G99232 NA non-coding upstream 501949 14546997 ~ 14550448 (+)
G99375 NA non-coding downstream 29804 15191669 ~ 15252714 (+)
G99384 NA non-coding downstream 86384 15248249 ~ 15271657 (+)
G99566 NA non-coding downstream 740586 15902451 ~ 15959723 (+)
G99644 NA non-coding downstream 1047578 16209443 ~ 16209643 (+)
G99662 NA non-coding downstream 1133960 16295825 ~ 16296030 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 951542 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 1167726 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 1439105 13576196 ~ 13613292 (+)
G98884 NA other upstream 1605118 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 1615250 13433051 ~ 13437147 (+)
G99475 NA other downstream 152171 15314036 ~ 15314414 (+)
G99541 NA other downstream 635085 15796950 ~ 15801634 (+)
G99624 NA other downstream 969179 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 1271578 16433443 ~ 16457842 (+)
AMCG00015687 NA other downstream 1332827 16494692 ~ 16498531 (+)

Expression


Co-expression Network