G99350


Basic Information

Item Value
gene id G99350
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14905607 ~ 14907243 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU124060
agtcggtgtgttggtgtgtcggtgtgtcagtgtttcaTTTGGTTCATCATTGTGTAAGTCtcagcacagtgcagtgaccGCTCCCTCTCCTGTGTGTTGCTGTAGGTCCCCCCTCTTCTCTGGGGTCGACAGTTACAGAGCCCCTGTACACCGAGGTCAGCCACCGGCACCGCAACACTGAGAGACTGACACAGGGTAGCCAGCAGCAGGATTTATCAGAACTGGTTCCCAGTGGCCACCCAGACACTCCGCTCACCACCGTCTATGATGAGATCCGGCCCAGAGAGCAGGGGGAGTGCTgacagagggaaagagagaggtgggaagagagacagacatacacacagtgaaagggagagagtgagatggAAAGAGGGACAGCTTTGAGACCAATGATGCAACAATGGCCCTAGTTCCTGGCTGTGAGGCCTGTGCCTGCCTCCATCCCTGCGCTGAGCCGCTGACACAAATGTGGTGTGAGTGTGGGCAGGCTGGGGCGACCTCTGCTGGTGTATCTGGAACTGCAGCTGTGGTTGTCAGTCAGCTGGTAGGTCAAGGTGTGGCTCAGTAGCTGCCTCTGTTGGCACGAGTGCTGCAGGTCCAGGCTTGGAGTCGAGTGGCTGCAAATCCCAGTGTAAAGAATCTTTGGCTGTCGCAAAaggtttagtttttagttttaattttaaatttaatttaatttaattggggggggggggtggggggcagtggGACTAGAGTCTGAAAATGTTGCAAATTACTTTCAGGTCACACACATAGCTGTCTCACGTCCCCCTTCCTGATAACCCTTCTCGTTCTCACCTAATAGCAACATAGTAAAtcagacatatatatattatatacacacacatatatattttgtattttaaattatgtgatTGGATGTGATTATATTGTGTCAATATCAAAGTGATGCAGAGGTAGCACCCTTTGTAAATGCACAcctgtgtttttattgatggctgtgtatttttgtatttgctctGTCACGGGTTCACTGCTGGCTGGTAAAGCCTATCGCACCTCAGAAGACAGTGAGACTGGATTGCTGCAGGGGACGCAGCGTCATGTCAGCACCTGTGTGTGTTAATGGAGGGGGGAATGGGATTCAGGTTGAAATGTATCATTTCCATTAGGAAATTTTTCCCAGCTCCTCCACCCGCCCTTCCTTGAAAGCCCCCGACCAACAatcttcctgttcttctctctgtCCCACATCTGATAATATCCCGCTGAGAATCTCTCCCCACTGTTGATTTGTTCAATATATTCCTggtaattgtaataaataactaaattgcACTAAAATGAGTGTCAACGATGGCTCATATTTCTTCACTCAGTCATACAATCGATTAAAATCGAATTGAATCATCCTATAAATCtctgaaaaacacaattctgC
>TU124061
agtcggtgtgttggtgtgtcggtgtgtcagtgtttcaTTTGGTTCATCATTGTGTAAGTCtcagcacagtgcagtgaccGCTCCCTCTCCTGTGTGTTGCTGTAGGTCCCCCCTCTTCTCTGGGGTCGACAGTTACAGAGCCCCTGTACACCGAGGTCAGCCACCGGCACCGCAACACTGAGAGACTGACACAGGGTAGCCAGCAGGATTTATCAGAACTGGTTCCCAGTGGCCACCCAGACACTCCGCTCACCACCGTCTATGATGAGATCCGGCCCAGAGAGCAGGGGGAGTGCTgacagagggaaagagagaggtgggaagagagacagacatacacacagtgaaagggagagagtgagatggAAAGAGGGACAGCTTTGAGACCAATGATGCAACAATGGCCCTAGTTCCTGGCTGTGAGGCCTGTGCCTGCCTCCATCCCTGCGCTGAGCCGCTGACACAAATGTGGTGTGAGTGTGGGCAGGCTGGGGCGACCTCTGCTGGTGTATCTGGAACTGCAGCTGTGGTTGTCAGTCAGCTGGTAGGTCAAGGTGTGGCTCAGTAGCTGCCTCTGTTGGCACGAGTGCTGCAGGTCCAGGCTTGGAGTCGAGTGGCTGCAAATCCCAGTGTAAAGAATCTTTGGCTGTCGCAAAaggtttagtttttagttttaattttaaatttaatttaatttaattggggggggggggtggggggcagtggGACTAGAGTCTGAAAATGTTGCAAATTACTTTCAGGTCACACACATAGCTGTCTCACGTCCCCCTTCCTGATAACCCTTCTCGTTCTCACCTAATAGCAACATAGTAAAtcagacatatatatattatatacacacacatatatattttgtattttaaattatgtgatTGGATGTGATTATATTGTGTCAATATCAAAGTGATGCAGAGGTAGCACCCTTTGTAAATGCACAcctgtgtttttattgatggctgtgtatttttgtatttgctctGTCACGGGTTCACTGCTGGCTGGTAAAGCCTATCGCACCTCAGAAGACAGTGAGACTGGATTGCTGCAGGGGACGCAGCGTCATGTCAGCACCTGTGTGTGTTAATGGAGGGGGGAATGGGATTCAGGTTGAAATGTATCATTTCCATTAGGAAATTTTTCCCAGCTCCTCCACCCGCCCTTCCTTGAAAGCCCCCGACCAACAatcttcctgttcttctctctgtCCCACATCTGATAATATCCCGCTGAGAATCTCTCCCCACTGTTGATTTGTTCAATATATTCCTggtaattgtaataaataactaaattgcACTAAAATGAGTGTCAACGATGGCTCATATTTCTTCACTCAGTCATACAATCGATTAAAATCGAATTGAATCATCCTATAAATCtctgaaaaacacaattctgC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124060 True 1423 lncRNA 0.47 2 14905607 14907243
TU124061 False 1420 lncRNA 0.47 2 14905607 14907243

Neighbor

gene id symbol gene type direction distance location
AMCG00015648 NA coding upstream 14664 14830842 ~ 14890943 (+)
AMCG00015646 NA coding upstream 98209 14720074 ~ 14807398 (+)
AMCG00015643 NA coding upstream 288851 14609879 ~ 14616756 (+)
AMCG00015638 p2rx3b,LOC107556786,LOC107674197,LOC107664541,LOC107746906 coding upstream 323257 14580949 ~ 14582350 (+)
AMCG00015637 ssrp1,LOC108262778 coding upstream 332572 14557749 ~ 14573035 (+)
AMCG00015653 NA coding downstream 59360 14966603 ~ 14968812 (+)
AMCG00015650 NA coding downstream 85637 14992880 ~ 15009509 (+)
AMCG00015654 NA coding downstream 230803 15138046 ~ 15156253 (+)
AMCG00015656 NA coding downstream 298347 15205590 ~ 15214257 (+)
AMCG00015661 NA coding downstream 352798 15260041 ~ 15269845 (+)
G99342 NA non-coding upstream 25532 14879756 ~ 14880075 (+)
G99325 NA non-coding upstream 129146 14776098 ~ 14776461 (+)
G99259 NA non-coding upstream 286997 14618251 ~ 14618610 (+)
G99232 NA non-coding upstream 355159 14546997 ~ 14550448 (+)
G99229 NA non-coding upstream 409980 14493014 ~ 14495627 (+)
G99348 NA non-coding downstream 145154 15052397 ~ 15161865 (+)
G99375 NA non-coding downstream 284426 15191669 ~ 15252714 (+)
G99384 NA non-coding downstream 341006 15248249 ~ 15271657 (+)
G99566 NA non-coding downstream 995208 15902451 ~ 15959723 (+)
G99644 NA non-coding downstream 1302200 16209443 ~ 16209643 (+)
G99074 aldob,LOC107588335,LOC108424229,LOC108269036,LOC103390983,LOC102232942 other upstream 804752 14096945 ~ 14100855 (+)
AMCG00015608 NA other upstream 1020936 13881425 ~ 13884671 (+)
AMCG00015602 NA other upstream 1292315 13576196 ~ 13613292 (+)
G98884 NA other upstream 1458328 13445525 ~ 13447279 (+)
AMCG00015591 LOC101069382,LOC104961169,LOC107581227 other upstream 1468460 13433051 ~ 13437147 (+)
AMCG00015657 NA other downstream 141680 15048923 ~ 15200978 (+)
G99475 NA other downstream 406793 15314036 ~ 15314414 (+)
G99541 NA other downstream 889707 15796950 ~ 15801634 (+)
G99624 NA other downstream 1223801 16131044 ~ 16131387 (+)
AMCG00015682 NA other downstream 1526200 16433443 ~ 16457842 (+)

Expression


Co-expression Network