Gene
RNA
| Item | Value |
|---|---|
| gene id | G100005 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 18297039 ~ 18298304 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006261 | DNA-dependent DNA replication | biological_process |
| GO:0006269 | DNA replication, synthesis of RNA primer | biological_process |
| GO:0043226 | organelle | cellular_component |
| GO:0008094 | DNA-dependent ATPase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU124914 | True | 593 | lncRNA | 0.43 | 3 | 18297039 | 18298304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015715 | prmt9 | coding | upstream | 228364 | 18057882 ~ 18068675 (+) |
| AMCG00015714 | nr3c2,mra,mrb | coding | upstream | 343970 | 17945489 ~ 17953069 (+) |
| AMCG00015716 | nr3c2,LOC107550687,LOC107742541,LOC107670737 | coding | upstream | 377557 | 17890492 ~ 17919482 (+) |
| AMCG00015709 | lrba,LOC107598261 | coding | upstream | 849378 | 17416375 ~ 17447661 (+) |
| AMCG00015710 | lrba | coding | upstream | 911714 | 17351282 ~ 17385325 (+) |
| AMCG00015726 | slc10a7,LOC106591891 | coding | downstream | 154073 | 18452377 ~ 18458170 (+) |
| AMCG00015728 | NA | coding | downstream | 379514 | 18677818 ~ 18682808 (+) |
| AMCG00015727 | NA | coding | downstream | 391434 | 18689738 ~ 18716514 (+) |
| AMCG00015731 | NA | coding | downstream | 507785 | 18806089 ~ 18828015 (+) |
| AMCG00015734 | anapc10,LOC107550153,LOC107564421 | coding | downstream | 542342 | 18840646 ~ 18851278 (+) |
| G99932 | NA | non-coding | upstream | 340409 | 17954485 ~ 17956630 (+) |
| G99934 | NA | non-coding | upstream | 363711 | 17932999 ~ 17933328 (+) |
| G99933 | NA | non-coding | upstream | 459139 | 17837617 ~ 17837900 (+) |
| G99915 | NA | non-coding | upstream | 696131 | 17600703 ~ 17600908 (+) |
| G99867 | NA | non-coding | upstream | 831525 | 17450084 ~ 17465514 (+) |
| G100046 | NA | non-coding | downstream | 330018 | 18628322 ~ 18630144 (+) |
| G100082 | NA | non-coding | downstream | 459758 | 18758062 ~ 18844449 (+) |
| G100143 | NA | non-coding | downstream | 822524 | 19120828 ~ 19125504 (+) |
| G100145 | NA | non-coding | downstream | 834760 | 19133064 ~ 19167834 (+) |
| G100232 | NA | non-coding | downstream | 1414583 | 19712887 ~ 19713244 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 1165264 | 17098459 ~ 17131775 (+) |
| AMCG00015687 | NA | other | upstream | 1798508 | 16494692 ~ 16498531 (+) |
| AMCG00015682 | NA | other | upstream | 1839197 | 16433443 ~ 16457842 (+) |
| G99624 | NA | other | upstream | 2165652 | 16131044 ~ 16131387 (+) |
| G99541 | NA | other | upstream | 2495405 | 15796950 ~ 15801634 (+) |
| G100007 | NA | other | downstream | 21752 | 18320056 ~ 18325904 (+) |
| AMCG00015725 | smad1 | other | downstream | 446583 | 18744887 ~ 18771966 (+) |
| G100338 | herc3 | other | downstream | 1969103 | 20267407 ~ 20268285 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | downstream | 4380533 | 22678837 ~ 22683895 (+) |
| G101061 | NA | other | downstream | 6566785 | 24865089 ~ 24865552 (+) |
