G100082


Basic Information

Item Value
gene id G100082
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 18758062 ~ 18844449 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125015
tacttttttccctcactgtagctaaGTGTCTgggagatttattttatttatttttgaaatgctgaTCCTTAACATCATAATACAGTAATTAGCTAATACATTCAGCTAAAACAGGACCTTacaatagtttttgttttttctttttcaattggTCACCTTCCACCTTTAATTCATCCTCTTTTCCttaatattaatgtaacaaCCCATGAGACTGCTTGGGTATACAATGGAATACTGCAATGTAAActagaaacaaagaaaaaaaattaaacaagacCAGCGTGGATACTTTTAATGAGTATGATGGTCTGATTATTACAGTTGGTCACAAAGATCAAGTATCTTCCAGATGCCAACCCACCCCTGTGCCATTCTGCAATGTGCCCAATTCAGACATCCTTCAAGTAAAGTGtaaccccctccctctcctcgaACTCCAGCCCTTGTTTTCAACAGGGCCGGGCAAATAAGCAGTTCTGTCTAGGACACTGATGAAATAGGATTGTGGGGGGATCCCATCTGAGTAAGAACTTTATCCAGCCACTGCAGAGGACCATGCAAGTGAATCTCAATCCAGCAGGGGGTGCTAGTGACATCCTGGCGGTGATACTCTGCACCCCAGCCCTGGAAatggacaacaacaacaacaacaacaacaacaacaacaaatcagaATCCACCCGTCTCAGATGAAAACAGAAGATAAATCAATAACACTATTGTGCCTTGCTCCCTTTGCACTGAGGCCAAGTTAAATGAGTGATTGGGCTGGTTCTCATTCTGTGCTGTAGAAGTTgacaataacataataaaaactgtttccAAAACCCACTGGGATGACAACAAAACCGCCCCATACTTAAATCATACAGATGTTTTTCCCCTCCCGTTGCATCATCGCATTCAAAATAACTGTCCTTGTATTACGACACTTCCAATTTGAGCAAATGTGTCATCTGCTTCAATATACTGCTCAtttttacagtgaggggaaaaaagtatttgatcccctgctgattttgtacgtttgcccactgacaaagaaatgatcagt

Function

GO:

id name namespace
GO:0008194 UDP-glycosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125015 True 1054 lncRNA 0.40 2 18758062 18844449

Neighbor

gene id symbol gene type direction distance location
AMCG00015727 NA coding upstream 41548 18689738 ~ 18716514 (+)
AMCG00015728 NA coding upstream 75254 18677818 ~ 18682808 (+)
AMCG00015726 slc10a7,LOC106591891 coding upstream 299892 18452377 ~ 18458170 (+)
AMCG00015715 prmt9 coding upstream 689387 18057882 ~ 18068675 (+)
AMCG00015714 nr3c2,mra,mrb coding upstream 804993 17945489 ~ 17953069 (+)
AMCG00015736 frem3,LOC106610210,LOC106610213 coding downstream 213613 19058062 ~ 19063854 (+)
AMCG00015737 frem3,LOC107725184 coding downstream 255771 19100220 ~ 19108988 (+)
AMCG00015741 NA coding downstream 604457 19448906 ~ 19512925 (+)
AMCG00015742 NA coding downstream 795597 19640046 ~ 19671896 (+)
AMCG00015744 NA coding downstream 859974 19704423 ~ 19705094 (+)
G100046 NA non-coding upstream 127918 18628322 ~ 18630144 (+)
G100005 NA non-coding upstream 459758 18297039 ~ 18298304 (+)
G99932 NA non-coding upstream 801432 17954485 ~ 17956630 (+)
G99934 NA non-coding upstream 824734 17932999 ~ 17933328 (+)
G99933 NA non-coding upstream 920162 17837617 ~ 17837900 (+)
G100143 NA non-coding downstream 276379 19120828 ~ 19125504 (+)
G100145 NA non-coding downstream 288615 19133064 ~ 19167834 (+)
G100232 NA non-coding downstream 868438 19712887 ~ 19713244 (+)
G100241 NA non-coding downstream 882123 19726572 ~ 19782763 (+)
G100349 NA non-coding downstream 1480161 20324610 ~ 20327167 (+)
G100007 NA other upstream 432158 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 1626287 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 2259531 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 2300220 16433443 ~ 16457842 (+)
G99624 NA other upstream 2626675 16131044 ~ 16131387 (+)
G100338 herc3 other downstream 1422958 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 3834388 22678837 ~ 22683895 (+)
G101061 NA other downstream 6020640 24865089 ~ 24865552 (+)
G101248 NA other downstream 7419466 26263915 ~ 26264308 (+)
G101275 NA other downstream 7528704 26373153 ~ 26377699 (+)

Expression


Co-expression Network