Gene
RNA
| Item | Value |
|---|---|
| gene id | G100143 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 19120828 ~ 19125504 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125101 | True | 716 | lncRNA | 0.51 | 3 | 19120828 | 19125504 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015737 | frem3,LOC107725184 | coding | upstream | 11840 | 19100220 ~ 19108988 (+) |
| AMCG00015736 | frem3,LOC106610210,LOC106610213 | coding | upstream | 56974 | 19058062 ~ 19063854 (+) |
| AMCG00015734 | anapc10,LOC107550153,LOC107564421 | coding | upstream | 269550 | 18840646 ~ 18851278 (+) |
| AMCG00015731 | NA | coding | upstream | 292813 | 18806089 ~ 18828015 (+) |
| AMCG00015727 | NA | coding | upstream | 404314 | 18689738 ~ 18716514 (+) |
| AMCG00015741 | NA | coding | downstream | 323402 | 19448906 ~ 19512925 (+) |
| AMCG00015742 | NA | coding | downstream | 514542 | 19640046 ~ 19671896 (+) |
| AMCG00015744 | NA | coding | downstream | 578919 | 19704423 ~ 19705094 (+) |
| AMCG00015746 | LOC106527319,LOC108251603,LOC103373330,LOC100701224,LOC102312318,LOC102313262,LOC101469181,LOC104949412 | coding | downstream | 637297 | 19762801 ~ 19791302 (+) |
| AMCG00015745 | rnf150,LOC107729769 | coding | downstream | 688086 | 19813590 ~ 19821835 (+) |
| G100082 | NA | non-coding | upstream | 276379 | 18758062 ~ 18844449 (+) |
| G100046 | NA | non-coding | upstream | 490684 | 18628322 ~ 18630144 (+) |
| G100005 | NA | non-coding | upstream | 822524 | 18297039 ~ 18298304 (+) |
| G99932 | NA | non-coding | upstream | 1164198 | 17954485 ~ 17956630 (+) |
| G99934 | NA | non-coding | upstream | 1187500 | 17932999 ~ 17933328 (+) |
| G100145 | NA | non-coding | downstream | 7560 | 19133064 ~ 19167834 (+) |
| G100232 | NA | non-coding | downstream | 587383 | 19712887 ~ 19713244 (+) |
| G100241 | NA | non-coding | downstream | 601068 | 19726572 ~ 19782763 (+) |
| G100349 | NA | non-coding | downstream | 1199106 | 20324610 ~ 20327167 (+) |
| G100461 | NA | non-coding | downstream | 1653842 | 20779346 ~ 20780467 (+) |
| AMCG00015725 | smad1 | other | upstream | 348862 | 18744887 ~ 18771966 (+) |
| G100007 | NA | other | upstream | 794924 | 18320056 ~ 18325904 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 1989053 | 17098459 ~ 17131775 (+) |
| AMCG00015687 | NA | other | upstream | 2622297 | 16494692 ~ 16498531 (+) |
| AMCG00015682 | NA | other | upstream | 2662986 | 16433443 ~ 16457842 (+) |
| G100338 | herc3 | other | downstream | 1141903 | 20267407 ~ 20268285 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | downstream | 3553333 | 22678837 ~ 22683895 (+) |
| G101061 | NA | other | downstream | 5739585 | 24865089 ~ 24865552 (+) |
| G101248 | NA | other | downstream | 7138411 | 26263915 ~ 26264308 (+) |
| G101275 | NA | other | downstream | 7247649 | 26373153 ~ 26377699 (+) |
