G100145


Basic Information

Item Value
gene id G100145
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 19133064 ~ 19167834 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125103
TTTATAATGCATACCGGTCTGGTTTATTTagttcactttaaaatgtacatttgtcttttgattgattttttaaaaaaagatacaaagcCTCAAGATTTAGTTTGTCATGTAACAAGTAACTTCTGCAGAAGAGGAGGGAAATTAAGTCATCGGGACATAAAACGTCAGGTCAGCGTAGGCACACCTTTTGTACGGGTACATGCTGGAATAGGAAAGCAAATATGTACAGGTGAGCTAAGAGTATCTGGACAAAGCAGAACATATGCTTTGTGTCTTCTACATTTAAGTACGGAGAGGTTAGTAAAGCtagtacatttacaaacagtAAGATTCATAAGTACTTTAAGAGTTTAGGCATAAGGTCAAATATTTTGTCTTATTTACAGCAGAATATCAAGTCATCTACATAAGGCAGtcccaagaaaaagaaaatgtggaaagcaataaaaaaaaaaaacaataaattacaacaatctaataaaagaGACGTTAATGTTGAACAAGCTATCTAGTTAAAGGaatgaagaataaaacaaattcctgatgcacaaataaaaactgGCACTAGTCAAAAAAGGCATCTTTAACAGcaaatttgttttcttaagtaTTATTAAACAGTTTACAGATCATCACAAAACTTTAAATTTATCAGTAGTGAGTGGACAGCAGGACCACTACTTTTACAAGATGAACACCTGactacttttattaaaaaataaattataaatggatAGCTGTATTAGTATTTATGAGTacctgatttctttttttttttcctttagagAGTTTGTTACCTTGCATAACTAACAGAAAGCTTGCAAACTTCCCATTAAAAAGCTGTCACAGTTATCAATTCCACTATTTTCATATCATAAAGCTGACATGACCACCTCAGTAGGTGCAGGACTCTATCCCGCAGAATCCGCACTTTAGCGTTCACACAGTAGATATTCAATACACGCGAAGGACACTTTAATGAATATACATAACACTTTTTACACAGACTAATGTACTTGCATTTATGTCTTAGCAAATGTAACATAATGCTAAagaacaagttttttttttttcttttttttttttttttttatttttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125103 True 1100 lncRNA 0.32 2 19133064 19167834

Neighbor

gene id symbol gene type direction distance location
AMCG00015737 frem3,LOC107725184 coding upstream 24076 19100220 ~ 19108988 (+)
AMCG00015736 frem3,LOC106610210,LOC106610213 coding upstream 69210 19058062 ~ 19063854 (+)
AMCG00015734 anapc10,LOC107550153,LOC107564421 coding upstream 281786 18840646 ~ 18851278 (+)
AMCG00015731 NA coding upstream 305049 18806089 ~ 18828015 (+)
AMCG00015727 NA coding upstream 416550 18689738 ~ 18716514 (+)
AMCG00015741 NA coding downstream 281072 19448906 ~ 19512925 (+)
AMCG00015742 NA coding downstream 472212 19640046 ~ 19671896 (+)
AMCG00015744 NA coding downstream 536589 19704423 ~ 19705094 (+)
AMCG00015746 LOC106527319,LOC108251603,LOC103373330,LOC100701224,LOC102312318,LOC102313262,LOC101469181,LOC104949412 coding downstream 594967 19762801 ~ 19791302 (+)
AMCG00015745 rnf150,LOC107729769 coding downstream 645756 19813590 ~ 19821835 (+)
G100143 NA non-coding upstream 7560 19120828 ~ 19125504 (+)
G100082 NA non-coding upstream 288615 18758062 ~ 18844449 (+)
G100046 NA non-coding upstream 502920 18628322 ~ 18630144 (+)
G100005 NA non-coding upstream 834760 18297039 ~ 18298304 (+)
G99932 NA non-coding upstream 1176434 17954485 ~ 17956630 (+)
G100232 NA non-coding downstream 545053 19712887 ~ 19713244 (+)
G100241 NA non-coding downstream 558738 19726572 ~ 19782763 (+)
G100349 NA non-coding downstream 1156776 20324610 ~ 20327167 (+)
G100461 NA non-coding downstream 1611512 20779346 ~ 20780467 (+)
G100483 NA non-coding downstream 1660494 20828328 ~ 20828614 (+)
AMCG00015725 smad1 other upstream 361098 18744887 ~ 18771966 (+)
G100007 NA other upstream 807160 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 2001289 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 2634533 16494692 ~ 16498531 (+)
AMCG00015682 NA other upstream 2675222 16433443 ~ 16457842 (+)
G100338 herc3 other downstream 1099573 20267407 ~ 20268285 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 3511003 22678837 ~ 22683895 (+)
G101061 NA other downstream 5697255 24865089 ~ 24865552 (+)
G101248 NA other downstream 7096081 26263915 ~ 26264308 (+)
G101275 NA other downstream 7205319 26373153 ~ 26377699 (+)

Expression


Co-expression Network