Gene
RNA
| Item | Value |
|---|---|
| gene id | G100232 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 19712887 ~ 19713244 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125219 | True | 358 | lncRNA | 0.49 | 1 | 19712887 | 19713244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015744 | NA | coding | upstream | 7793 | 19704423 ~ 19705094 (+) |
| AMCG00015742 | NA | coding | upstream | 40991 | 19640046 ~ 19671896 (+) |
| AMCG00015741 | NA | coding | upstream | 199962 | 19448906 ~ 19512925 (+) |
| AMCG00015737 | frem3,LOC107725184 | coding | upstream | 603899 | 19100220 ~ 19108988 (+) |
| AMCG00015736 | frem3,LOC106610210,LOC106610213 | coding | upstream | 649033 | 19058062 ~ 19063854 (+) |
| AMCG00015746 | LOC106527319,LOC108251603,LOC103373330,LOC100701224,LOC102312318,LOC102313262,LOC101469181,LOC104949412 | coding | downstream | 49557 | 19762801 ~ 19791302 (+) |
| AMCG00015745 | rnf150,LOC107729769 | coding | downstream | 100346 | 19813590 ~ 19821835 (+) |
| AMCG00015748 | tbc1d9 | coding | downstream | 154625 | 19867869 ~ 19905638 (+) |
| AMCG00015747 | ucp1,LOC107703842,LOC106610252 | coding | downstream | 247300 | 19960544 ~ 19968342 (+) |
| AMCG00015756 | NA | coding | downstream | 322104 | 20035348 ~ 20038407 (+) |
| G100145 | NA | non-coding | upstream | 545053 | 19133064 ~ 19167834 (+) |
| G100143 | NA | non-coding | upstream | 587383 | 19120828 ~ 19125504 (+) |
| G100082 | NA | non-coding | upstream | 868438 | 18758062 ~ 18844449 (+) |
| G100046 | NA | non-coding | upstream | 1082743 | 18628322 ~ 18630144 (+) |
| G100005 | NA | non-coding | upstream | 1414583 | 18297039 ~ 18298304 (+) |
| G100241 | NA | non-coding | downstream | 13328 | 19726572 ~ 19782763 (+) |
| G100349 | NA | non-coding | downstream | 611366 | 20324610 ~ 20327167 (+) |
| G100461 | NA | non-coding | downstream | 1066102 | 20779346 ~ 20780467 (+) |
| G100483 | NA | non-coding | downstream | 1115084 | 20828328 ~ 20828614 (+) |
| G100502 | NA | non-coding | downstream | 1350806 | 21064050 ~ 21065385 (+) |
| AMCG00015725 | smad1 | other | upstream | 940921 | 18744887 ~ 18771966 (+) |
| G100007 | NA | other | upstream | 1386983 | 18320056 ~ 18325904 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 2581112 | 17098459 ~ 17131775 (+) |
| AMCG00015687 | NA | other | upstream | 3214356 | 16494692 ~ 16498531 (+) |
| AMCG00015682 | NA | other | upstream | 3255045 | 16433443 ~ 16457842 (+) |
| G100338 | herc3 | other | downstream | 554163 | 20267407 ~ 20268285 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | downstream | 2965593 | 22678837 ~ 22683895 (+) |
| G101061 | NA | other | downstream | 5151845 | 24865089 ~ 24865552 (+) |
| G101248 | NA | other | downstream | 6550671 | 26263915 ~ 26264308 (+) |
| G101275 | NA | other | downstream | 6659909 | 26373153 ~ 26377699 (+) |
