Gene
RNA
| Item | Value |
|---|---|
| gene id | G100483 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 20828328 ~ 20828614 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU125516 | True | 287 | lncRNA | 0.39 | 1 | 20828328 | 20828614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015774 | NA | coding | upstream | 24474 | 20802997 ~ 20803854 (+) |
| AMCG00015775 | NA | coding | upstream | 25395 | 20802697 ~ 20802933 (+) |
| AMCG00015773 | smyd5 | coding | upstream | 53708 | 20760830 ~ 20774620 (+) |
| AMCG00015767 | NA | coding | upstream | 171801 | 20622793 ~ 20656527 (+) |
| AMCG00015766 | NA | coding | upstream | 208558 | 20586870 ~ 20619770 (+) |
| AMCG00015779 | NA | coding | downstream | 218156 | 21046770 ~ 21053142 (+) |
| AMCG00015781 | atrn | coding | downstream | 328540 | 21157154 ~ 21224579 (+) |
| AMCG00015782 | NA | coding | downstream | 398666 | 21227280 ~ 21229655 (+) |
| AMCG00015786 | NA | coding | downstream | 1217335 | 22045949 ~ 22065359 (+) |
| AMCG00015787 | NA | coding | downstream | 1274504 | 22103118 ~ 22146071 (+) |
| G100461 | NA | non-coding | upstream | 47861 | 20779346 ~ 20780467 (+) |
| G100349 | NA | non-coding | upstream | 501161 | 20324610 ~ 20327167 (+) |
| G100241 | NA | non-coding | upstream | 1045565 | 19726572 ~ 19782763 (+) |
| G100232 | NA | non-coding | upstream | 1115084 | 19712887 ~ 19713244 (+) |
| G100145 | NA | non-coding | upstream | 1660494 | 19133064 ~ 19167834 (+) |
| G100502 | NA | non-coding | downstream | 235436 | 21064050 ~ 21065385 (+) |
| G100507 | NA | non-coding | downstream | 477992 | 21306606 ~ 21310605 (+) |
| G100568 | NA | non-coding | downstream | 985757 | 21814371 ~ 21814715 (+) |
| G100639 | NA | non-coding | downstream | 1460009 | 22288623 ~ 22288848 (+) |
| G100641 | NA | non-coding | downstream | 1617760 | 22446374 ~ 22449216 (+) |
| G100338 | herc3 | other | upstream | 560043 | 20267407 ~ 20268285 (+) |
| AMCG00015725 | smad1 | other | upstream | 2056362 | 18744887 ~ 18771966 (+) |
| G100007 | NA | other | upstream | 2502424 | 18320056 ~ 18325904 (+) |
| AMCG00015703 | rps3a,LOC106592945 | other | upstream | 3696553 | 17098459 ~ 17131775 (+) |
| AMCG00015687 | NA | other | upstream | 4329797 | 16494692 ~ 16498531 (+) |
| AMCG00015796 | hspa12b,LOC107583310,LOC107697252,LOC107721672 | other | downstream | 1850223 | 22678837 ~ 22683895 (+) |
| G101061 | NA | other | downstream | 4036475 | 24865089 ~ 24865552 (+) |
| G101248 | NA | other | downstream | 5435301 | 26263915 ~ 26264308 (+) |
| G101275 | NA | other | downstream | 5544539 | 26373153 ~ 26377699 (+) |
| G101400 | NA | other | downstream | 7061938 | 27890552 ~ 27992014 (+) |
