G100502


Basic Information

Item Value
gene id G100502
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 21064050 ~ 21065385 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125537
TGCTTGGCACCCTGCCGGAGCCAGTCCTTCAGATTCTCCTCGCCCAGGCCACAGCCGTCGAACACCAGGAAGCAGTCTGGGCCGTCTTGATGTAGCTCCATGCCCTGTGGTGGGGGTGTGGGTCCTTCCTGCGCTGGGAGGAGACTCAGGCTGTTCGTCAGGGTGTTGAAGCTCACCTCCACTAGCTTCTCAGAGTCTGAGAAAGAAATCAGACATGGCCGAGTTCAAAAGCTTGAGCTGGAGGGggaaattaattacataagAAATGCTGATGTGCATTTTCTAAGCTGAAGTCTAAATAAAGGCACTTTGGAAAAGCGGCTAACAAATGTTCTGACTTTGATAAGATCGTAAGTGATGAAGTTTACATGACGCTAATCCTTTTGTAACTAAAGTTAAAAGTTGATTAAGTTTCCTTCCAAATAATTAAGGCAGGGCTGTGTATTTTGGATTTCAatatgacattatatatatatatctattcttaaaaataatgaccACCTATGccattcataaaaatattaaatttgcatttgaatCGTTTGGCCAGGTATAGTATTTCAGTTAAAAGTACAGATAAATGGACAGTGTCTAACACCTAATACAAACCACTCTCTTCTTCGTGCCTAGCCCTTAACTTTTATATTATTGCAATTTCAACGTTTTATATTGAAAATCAGTGCAGACGGaagtaatgtttttcttaaatggtTAAGTCTCTTCCTTCTAGATCTTTCCACTGCCACAATATTTAGGACAGGGCCTACTCAATTTGGAGAAATCAGCAATTTCTGATTCCCACTGTACTATCTTCAAGCAGAAattcaaaccaaaaataaaaacatgcctaAGCAAGTGGAAACCACCACcccccacaaaacaaacactctgGTGGATCATAAACACTTTGGAAAACAGTCCAATTAATGGTCTTACAACATACTACAGTTGACATGCCATGAATGCATTCTTTCTTCTATAAATATCAGAAGCTTTATGAGTATTAAAAGATGCATTCAACATGTACTAAGCATAGAGCACATTATTTGAGATCTGCAAAACATGTAAGAGGTTAACGAGGTGTACTTGCTTCCCCAATTCAAGCTTAAGTTATAGTCTTACCAGTCGACATATGAGAAAAGGATAATTTTTACCAGAAAATCTGACTCTGCCCCAGATATTGTATATGTTTCCTGTGAAAGGATTTGGTCGCAAGGATGATTTTAATGCTgtgaaacagacacaaaaaaataattagtagCTATAGCTGTAGAACATAATTTTGCATTCTGcgttttagatttaaaaaggCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125537 True 1314 lncRNA 0.38 2 21064050 21065385

Neighbor

gene id symbol gene type direction distance location
AMCG00015779 NA coding upstream 10908 21046770 ~ 21053142 (+)
AMCG00015774 NA coding upstream 260196 20802997 ~ 20803854 (+)
AMCG00015775 NA coding upstream 261117 20802697 ~ 20802933 (+)
AMCG00015773 smyd5 coding upstream 289430 20760830 ~ 20774620 (+)
AMCG00015767 NA coding upstream 407523 20622793 ~ 20656527 (+)
AMCG00015781 atrn coding downstream 91769 21157154 ~ 21224579 (+)
AMCG00015782 NA coding downstream 161895 21227280 ~ 21229655 (+)
AMCG00015786 NA coding downstream 980564 22045949 ~ 22065359 (+)
AMCG00015787 NA coding downstream 1037733 22103118 ~ 22146071 (+)
AMCG00015788 NA coding downstream 1100846 22166231 ~ 22178257 (+)
G100483 NA non-coding upstream 235436 20828328 ~ 20828614 (+)
G100461 NA non-coding upstream 283583 20779346 ~ 20780467 (+)
G100349 NA non-coding upstream 736883 20324610 ~ 20327167 (+)
G100241 NA non-coding upstream 1281287 19726572 ~ 19782763 (+)
G100232 NA non-coding upstream 1350806 19712887 ~ 19713244 (+)
G100507 NA non-coding downstream 241221 21306606 ~ 21310605 (+)
G100568 NA non-coding downstream 748986 21814371 ~ 21814715 (+)
G100639 NA non-coding downstream 1223238 22288623 ~ 22288848 (+)
G100641 NA non-coding downstream 1380989 22446374 ~ 22449216 (+)
G100707 NA non-coding downstream 1755116 22820501 ~ 22820703 (+)
G100338 herc3 other upstream 795765 20267407 ~ 20268285 (+)
AMCG00015725 smad1 other upstream 2292084 18744887 ~ 18771966 (+)
G100007 NA other upstream 2738146 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 3932275 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 4565519 16494692 ~ 16498531 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 1613452 22678837 ~ 22683895 (+)
G101061 NA other downstream 3799704 24865089 ~ 24865552 (+)
G101248 NA other downstream 5198530 26263915 ~ 26264308 (+)
G101275 NA other downstream 5307768 26373153 ~ 26377699 (+)
G101400 NA other downstream 6825167 27890552 ~ 27992014 (+)

Expression


Co-expression Network