G100568


Basic Information

Item Value
gene id G100568
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 21814371 ~ 21814715 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125610
agaaatatcttctcattcctgtttaactgttttagtctgaaattgacacacgttaatagacactagattataggtggccctgcctatccttaatcattgaacagtaatcaattagggagaattgtggttacaagaaatgataggatctttctcggcacccaaatgtaaatgagactgatatatataacgagaagttatttgacttaaatactaacctgcattagttatttaatgtccgactaacaatactaatgagagactcaccttcgtcttactaaccggtattgtagtcaatgtgtttgtaattttgtgtaacgttttgtgtgttatcatatgtgattccat

Function

NR:

description
PREDICTED: lamin-B2

GO:

id name namespace
GO:0030031 cell projection assembly biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125610 True 345 lncRNA 0.34 1 21814371 21814715

Neighbor

gene id symbol gene type direction distance location
AMCG00015782 NA coding upstream 584716 21227280 ~ 21229655 (+)
AMCG00015781 atrn coding upstream 589792 21157154 ~ 21224579 (+)
AMCG00015779 NA coding upstream 761229 21046770 ~ 21053142 (+)
AMCG00015774 NA coding upstream 1010517 20802997 ~ 20803854 (+)
AMCG00015775 NA coding upstream 1011438 20802697 ~ 20802933 (+)
AMCG00015786 NA coding downstream 231234 22045949 ~ 22065359 (+)
AMCG00015787 NA coding downstream 288403 22103118 ~ 22146071 (+)
AMCG00015788 NA coding downstream 351516 22166231 ~ 22178257 (+)
AMCG00015795 cct7,LOC102781788 coding downstream 846346 22661061 ~ 22664968 (+)
AMCG00015797 NA coding downstream 892473 22707188 ~ 22715143 (+)
G100507 NA non-coding upstream 503766 21306606 ~ 21310605 (+)
G100502 NA non-coding upstream 748986 21064050 ~ 21065385 (+)
G100483 NA non-coding upstream 985757 20828328 ~ 20828614 (+)
G100461 NA non-coding upstream 1033904 20779346 ~ 20780467 (+)
G100349 NA non-coding upstream 1487204 20324610 ~ 20327167 (+)
G100639 NA non-coding downstream 473908 22288623 ~ 22288848 (+)
G100641 NA non-coding downstream 631659 22446374 ~ 22449216 (+)
G100707 NA non-coding downstream 1005786 22820501 ~ 22820703 (+)
G100709 NA non-coding downstream 1020539 22835254 ~ 22923396 (+)
G100776 NA non-coding downstream 1401336 23216051 ~ 23218316 (+)
G100338 herc3 other upstream 1546086 20267407 ~ 20268285 (+)
AMCG00015725 smad1 other upstream 3042405 18744887 ~ 18771966 (+)
G100007 NA other upstream 3488467 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 4682596 17098459 ~ 17131775 (+)
AMCG00015687 NA other upstream 5315840 16494692 ~ 16498531 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other downstream 864122 22678837 ~ 22683895 (+)
G101061 NA other downstream 3050374 24865089 ~ 24865552 (+)
G101248 NA other downstream 4449200 26263915 ~ 26264308 (+)
G101275 NA other downstream 4558438 26373153 ~ 26377699 (+)
G101400 NA other downstream 6075837 27890552 ~ 27992014 (+)

Expression


Co-expression Network