G100709


Basic Information

Item Value
gene id G100709
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 22835254 ~ 22923396 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU125778
acacacacacacacacacacacaaacaaacaaacaaacaaacaaacaaacagagccACAAGCCCCACCGCCACAGAAGCATACAGACAATCAGACGCACAGGACACAAGCAGGGTACGATGTGGCCGAGACGAACGCACAAGATGAACACAAAGTAATGGCACAGTGTAACATTTAGGAACATGCATGCCCTCTTTTGTATTAGTCCACAGTTAGGGGTTTGGGTGCAGGCTGCTGTGTTTACCCTCCAGTGCCTGTCTGCATACAACGTGCCTTGTTGCCTTTCCTGATTGCTATACAGCTATAACTGCAAGCATACAAAGGGCAGTTATGAGAGTCCAGTAACACCCTTGGCTCATAACATGACAGAAAGCTCAATTCTTTGGAGAGAAATGGCCCAATTCTCCCATAATGTGACACTGCCAGACTGCTACTCTATTATGGATGGCCacttgcatttttgtttttgctgcagtTGTGACTGTCCCGGAAGGGTCTGTCCCCAGCCCGGTGCTTATGTGTTGGCTTATGGCTCAGTCCTCCAGGGCTGTGTTGGTTCCTCCTTTGTAATGAAGTGAGATTTTAGAGAAGCTGTTAAAGGATTAGAAGAGGAAATTAAGTTACATTAGCGGTGCTTAATCTTTAaagcaggggtctccagccctaCACGGTCTTCTGGTTCTATTCCAGCTAAGCTTTGCAgtgattattttcattagtctgGATTAATGGGATCTTCTGCCCGATTGAAGACACCTCTGAAACCAGGGCcaggttggagaccactgctctAAGGCTTGGATATCTCATTTGAGAAAGGACTCTTAAGTATGCCACCTTGACACTACAATTCAAGTCCAATTCAAAGAAGTGGAGTACAGTGCCGAGATGAGCTTCCCCTGCAGTGATGGTAGTATTGGACGACTCAATTAATAATCTGCCAATCAACGTGACCGACGCGAACAACATTGATGGTGTTTTATTGCTGTTCAAGTTGAAATGTTGAGTGCGCTAATACCACGTCTACTTTGTGCTTCTTACGTTTACAAACCTCGGCTTCTCGGAAGGGGTGTGGTTTACATGCCAAGAACAGGTGGTCATGCCTGTAATACAGCAGGAGAAATGTTATTCACTGGAGGCCTATGGCTGTTGGTTAggaacatgtttttgttatagATCTAGATTTACTGGGTCTTAGATcagtgttatttaaaatatgtagtgTGACTCATTTGGATGCATTAACAATAACCAGTTCTGTTTGCAACTTGCTTGTCTCAACTTTTCAAAATGAGGTTTAAAATACGAGGACTTTCAAAACCAAAAGTGATGACTAAAGTCATCACTCTTgtggaatctttttttttttttcccagtccCCTTTGGGCTCTTTTGAGACTCAGTTGAGCACAACTCCAGTCCTAGAGTCTCTGTGAATCATCAGCACTCTATACACTTAAATTAATCCAACATGGAGTTGAACTGGGTTATTAACGTGGGTGGGAAAAAATTGTTGACACTGGCCCTCAGTGCTCCTCAACCCTGATTGAGCCCATTAACTGAACTCAATCTGGCTAATAAAAGTGAAAGGTGCGAATGTGCTCGTACCCAGAGTGCACCTTTCCAATGCCCTTATGATTAGGTGGCTGTTCTCAGGCTGACctatgcatttttctttatctgTCGTTTTATCAGTACATttcagtggaaaaaataaatattttg

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0005515 protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125778 True 1724 lncRNA 0.43 2 22835254 22923396

Neighbor

gene id symbol gene type direction distance location
AMCG00015794 NA coding upstream 67768 22758135 ~ 22767486 (+)
AMCG00015797 NA coding upstream 120111 22707188 ~ 22715143 (+)
AMCG00015795 cct7,LOC102781788 coding upstream 170286 22661061 ~ 22664968 (+)
AMCG00015788 NA coding upstream 656997 22166231 ~ 22178257 (+)
AMCG00015787 NA coding upstream 689183 22103118 ~ 22146071 (+)
AMCG00015811 NA coding downstream 25266 22948662 ~ 22958584 (+)
AMCG00015810 NA coding downstream 53524 22976920 ~ 22979992 (+)
AMCG00015813 NA coding downstream 186876 23110272 ~ 23116783 (+)
AMCG00015817 NA coding downstream 212182 23135578 ~ 23145714 (+)
AMCG00015818 NA coding downstream 227657 23151053 ~ 23157262 (+)
G100707 NA non-coding upstream 14551 22820501 ~ 22820703 (+)
G100641 NA non-coding upstream 386038 22446374 ~ 22449216 (+)
G100639 NA non-coding upstream 546406 22288623 ~ 22288848 (+)
G100568 NA non-coding upstream 1020539 21814371 ~ 21814715 (+)
G100507 NA non-coding upstream 1524649 21306606 ~ 21310605 (+)
G100776 NA non-coding downstream 292655 23216051 ~ 23218316 (+)
G100801 NA non-coding downstream 360295 23283691 ~ 23284077 (+)
G100858 NA non-coding downstream 838895 23762291 ~ 23762523 (+)
G100863 NA non-coding downstream 916402 23839798 ~ 23961637 (+)
G100903 NA non-coding downstream 1147430 24070826 ~ 24156851 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other upstream 151359 22678837 ~ 22683895 (+)
G100338 herc3 other upstream 2566969 20267407 ~ 20268285 (+)
AMCG00015725 smad1 other upstream 4063288 18744887 ~ 18771966 (+)
G100007 NA other upstream 4509350 18320056 ~ 18325904 (+)
AMCG00015703 rps3a,LOC106592945 other upstream 5703479 17098459 ~ 17131775 (+)
G101061 NA other downstream 1941693 24865089 ~ 24865552 (+)
G101248 NA other downstream 3340519 26263915 ~ 26264308 (+)
G101275 NA other downstream 3449757 26373153 ~ 26377699 (+)
G101400 NA other downstream 4967156 27890552 ~ 27992014 (+)
AMCG00015901 NA other downstream 5654104 28577500 ~ 28580829 (+)

Expression


Co-expression Network