G101271


Basic Information

Item Value
gene id G101271
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 26367597 ~ 26367905 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU126470
tctgattttCGCGAGTACCGATTGCAGGGCCCGAAAAGAGAAGGCCTGGAGTCCTGACAGTCCCCGTGTACGGTTGTACAGTTTAAACTCGGGACGAGTGCGGATTCTTTCCGGCCCACTGTGTTCAAACACTAGTGATGGAGGCAAGACAGTTTGATggtttttgcagtttttctggTTCGGTGGTCGGAGGGTCGGCGGCCGTTCGGAAGTTGAAAGTTTGAGAGCTGCTCACGCCAACGTGGCCTGGACTTAAAGCTGGATTCTGACGCCTGTTGCTTTCGACAATACTTGAGGTGTTGGATGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126470 True 309 lncRNA 0.52 1 26367597 26367905

Neighbor

gene id symbol gene type direction distance location
AMCG00015867 NA coding upstream 11503 26333482 ~ 26356094 (+)
AMCG00015872 NA coding upstream 58865 26306627 ~ 26308732 (+)
AMCG00015870 NA coding upstream 61803 26270391 ~ 26305794 (+)
AMCG00015868 NA coding upstream 106108 26254913 ~ 26261489 (+)
AMCG00015869 NA coding upstream 114351 26242131 ~ 26253246 (+)
AMCG00015875 NA coding downstream 153285 26521190 ~ 26525630 (+)
AMCG00015876 NA coding downstream 159205 26527110 ~ 26562104 (+)
AMCG00015877 NA coding downstream 194816 26562721 ~ 26567558 (+)
AMCG00015882 dctd,LOC107671033,LOC107550883,LOC106602441 coding downstream 304839 26672744 ~ 26699429 (+)
AMCG00015886 NA coding downstream 1449931 27817836 ~ 27840281 (+)
G101270 NA non-coding upstream 2538 26364295 ~ 26365059 (+)
G101116 NA non-coding upstream 642019 25667828 ~ 25725578 (+)
G101107 NA non-coding upstream 871678 25420890 ~ 25495919 (+)
G101088 NA non-coding upstream 957948 25408665 ~ 25409649 (+)
G101087 LOC107575789 non-coding upstream 959061 25388061 ~ 25408536 (+)
G101272 NA non-coding downstream 1580 26369485 ~ 26369703 (+)
G101273 NA non-coding downstream 2187 26370092 ~ 26370326 (+)
G101282 NA non-coding downstream 107155 26475060 ~ 26475349 (+)
G101306 NA non-coding downstream 201199 26569104 ~ 26572523 (+)
G101320 NA non-coding downstream 211808 26579713 ~ 26579971 (+)
G101248 NA other upstream 103289 26263915 ~ 26264308 (+)
G101061 NA other upstream 1502045 24865089 ~ 24865552 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other upstream 3683702 22678837 ~ 22683895 (+)
G100338 herc3 other upstream 6099312 20267407 ~ 20268285 (+)
AMCG00015725 smad1 other upstream 7595631 18744887 ~ 18771966 (+)
G101275 NA other downstream 5248 26373153 ~ 26377699 (+)
G101400 NA other downstream 1522647 27890552 ~ 27992014 (+)
AMCG00015901 NA other downstream 2209595 28577500 ~ 28580829 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other downstream 3256140 29624045 ~ 29652938 (+)
G101752 NA other downstream 3798123 30166028 ~ 30168289 (+)

Expression


Co-expression Network