G101486


Basic Information

Item Value
gene id G101486
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 28445916 ~ 28446217 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU126744
GTGGAATTTAAATGGAGGTCCAGAAGGCTTTTAAACAGGCACTGGCTCCAGTATAGACAACAAGGACACAAGCACTCAAAAATCACCTGTCAGGGCCGTCTGATATTAATCCACCAGCCGCTCTTCAAAGCCTTCAGGGTTTCTTACTGTCCCTCAAATCCTGTCTGGTGTGAAGCTAGATCAAACCTGCATGAGTGGAGAAGTGAGCCGTCCAGCTGGACTGCGCTGTGTTTCTGAACTGCATTTCAAACCTGAGGTTGAACCCAAGTTATACTGTGTTCAATGGTTAAtttttaacaaaa

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126744 True 302 lncRNA 0.45 1 28445916 28446217

Neighbor

gene id symbol gene type direction distance location
AMCG00015895 fbxo8,LOC107670846,LOC107752227 coding upstream 4604 28432038 ~ 28441312 (+)
AMCG00015897 NA coding upstream 46388 28396972 ~ 28399528 (+)
AMCG00015894 NA coding upstream 59228 28384914 ~ 28386688 (+)
AMCG00015896 glra3,LOC106610166,LOC106602381 coding upstream 73254 28339412 ~ 28372662 (+)
AMCG00015893 LOC106610164,LOC106602380 coding upstream 278839 28148894 ~ 28167077 (+)
AMCG00015900 hand2,LOC107558779,LOC107676684,LOC106610170,LOC106602386,LOC107752229,LOC107552491 coding downstream 94833 28541050 ~ 28543529 (+)
AMCG00015902 hmgb2,LOC104945199 coding downstream 140208 28586425 ~ 28588280 (+)
AMCG00015908 NA coding downstream 633212 29079429 ~ 29107579 (+)
AMCG00015912 NA coding downstream 744889 29191106 ~ 29195801 (+)
AMCG00015911 NA coding downstream 806669 29252886 ~ 29259988 (+)
G101404 NA non-coding upstream 448970 27995810 ~ 27996946 (+)
G101387 NA non-coding upstream 776163 27669432 ~ 27669753 (+)
G101381 NA non-coding upstream 1004673 27441027 ~ 27441243 (+)
G101340 NA non-coding upstream 1738815 26706876 ~ 26707101 (+)
G101320 NA non-coding upstream 1865945 26579713 ~ 26579971 (+)
G101504 NA non-coding downstream 143356 28589573 ~ 28591059 (+)
G101555 NA non-coding downstream 720718 29166935 ~ 29167213 (+)
G101556 NA non-coding downstream 728560 29174777 ~ 29177324 (+)
G101558 NA non-coding downstream 736314 29182531 ~ 29182869 (+)
G101560 NA non-coding downstream 739888 29186105 ~ 29186327 (+)
G101400 NA other upstream 453902 27890552 ~ 27992014 (+)
G101275 NA other upstream 2068217 26373153 ~ 26377699 (+)
G101248 NA other upstream 2181608 26263915 ~ 26264308 (+)
G101061 NA other upstream 3580364 24865089 ~ 24865552 (+)
AMCG00015796 hspa12b,LOC107583310,LOC107697252,LOC107721672 other upstream 5762021 22678837 ~ 22683895 (+)
AMCG00015901 NA other downstream 131283 28577500 ~ 28580829 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other downstream 1177828 29624045 ~ 29652938 (+)
G101752 NA other downstream 1719811 30166028 ~ 30168289 (+)
G101870 NA other downstream 2357872 30804089 ~ 30809238 (+)
G101930 NA other downstream 2816244 31262461 ~ 31287766 (+)

Expression


Co-expression Network