G101930


Basic Information

Item Value
gene id G101930
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 31262461 ~ 31287766 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU127298
TGGACGTGTTACGGCTTCTCATGAGGAAATCAGGGACACAGAGGAACCAGTCTCTGTCAGAATGAGTCacaatgtgtttattgcatTAACACAGCGCCCCCCGGCATCACCATGTGTGTGACTGCAGCGTGCCGGTGTCTACAGCTCCTCTCTGCCACTGTCAATGTGCTACGGCTCGCTCATTAACAACCAGTTGAGAGGAATACATTATTATCTGAATGAGACCAGTTTCAAATCCACACAGTTCACACACGGATGACAGCGTTGgcatgtattttacaaatatttcatattctgtATTTTCAGTTATCTGTATTTCAGTTCATGGGTCTTTTCTTTACAATTACAGACAATATCAGAGAGCCAGTCAAAGCTCGGTACAGCAGTTTCGGACTCCTGCGATTCATCGGACTGCTGGATGGCAGGAAATGTGATGCAATGTCAAAACTGTTTGATGACCAAAAACTACAAAGTGTGGAGTAATATGCACAACCCTTTGATTGTGTTGACTGAAGGCTGATCTCGTGGGAATGTGCGGCACACAGATGTTATGGGACGAATCTCTGGTGAATTACTGCACTTCATATTTCTACAGTCCCTCAGCACTGAGACCAAGGCAGGACAGGACAGCAGAGCCGTCTCTCTGAGTCTCACTCATCGTGGGGACATGTGTGACATTGTGCAGCTGCGGCTACAACTGTGTGTGAACTGACACGGTCAGAGAtgtgtttgtcatttattaCTGTGTCTGGAATCAACGGACAAGAGCTTTAATGACAAGGACAAGGACACCAGTCAGATCTTTTGAAACACTGCAGTGGCATCAGAGCCAGAGTGAATATCTGTGGGTTTGACACTGAGAGAAGGGCAGGGATGCCACGCTGCAATACACACTCCCACCACACAGTGGCACTGCAACACAATATAAACCACTCATTTAGAGCAATAGAAAGATCAGCGACTCAGTGTCATTGTGATTGTCTCAGTATTCAGTCACACAGATATTTGTACGTGTTAAAAATGACGACTTCTAAgactttgtttaattgtatgaacctctctgtctctcagtacAGTGTCAGAGCAGCTCCCCTGAGTGATGACTTTTTTTGTGTCAGAGATTGAAGAttttagttaaatattaataagGGTAATTATCGGTAtgatataaacatataaaacaatatagagCCCTTTAACACAGTACAGTGGGCACTCCTGTATCAGGCACTGTTTAGATATGTACAGGTCACACTGATGTAAAGCAGATATTTACAGCTCAGTCCATATGATATAAACGTAcagaacaacacacagcactttAATATCtttacacacagacagtgaTGTTAAACCTGTTCATTTATATACAGTTCAGTCAGTGTAAcgaaatgcattaaatactgtCTAGCACAGGGTGTCCACATGAGCCCCGCAGCAGTGTGAGCTCAGAGCAGGGTGTCCAGCTCAGGAGCCCCAGTCCCACAGCCTCTTCAGCACAGCTGTCAGTCCCCATGGCTGTACAGAGCACACTGGGGCTCagggctcctccaggacagagagacagttCGGGGGTGTAGTagagctgtgtgtcagtgtgctatAGTGACACAGTCAGTGGTGTAGTAGAGCTGTATGTCAGTGTGCTATAGTGACACAGTCAGTGGTGTAGTAGAGCTGTatgtcagtgtgctgtagtgacACAGTCAGTGGTGTAGTAGAGCTGTatgtcagtgtgctgtagtgacACAGTCAGGGGTGTAGTagagctgtgtgtcagtgtgctgtcaGTAAGAGGCCTCAGTGCTGTGGAGTGACAGAAGTGTGTGACCACACTGACTTACTGCTGGGTAAGATCCAGTTTTccagtttttcagttttacagtttttcatcCCTTCTCCTGCAGCCATCCTATCTCCAGTCCTGCCAGTCTCCTCTATCTTGTCCAGCAGCTCTGTGACCTGAGTGCTGTCGCTCCTGTCCCTGTTGTTGAGGACATGATACCTGTTCCCACATTTCTCCACAAGCCGCTGGAgctcctcccctcctctctcaatGTGCTGCTCAATGGTTGTGTCTCCCAGTCTGTCCCCCCAGGTGAACAGCACTATAGTGTGTCTCCAGACTCTCTCACTGAGGAGCTCCAGGTGTTCCTGCActgctctcctctctgtctctgtgaatGAGCCCAACACAGGAATGGTGAGGAGGAGAGCGTGGGGTCCCGgggggcacagagacacactgcgCACAATCTCCTGTTTAACACACTCTGGAGTCTCCTGTACAGAATCACTCCACCCCCAGCCTGGTGTGTGGACCACAGTGACCTGCCTCCCGGCCACTTCACCCTGGCTCTTCTCACTCtgctcagtctctctctcagtgttaaACGCCTCTCTGCCCAGGATGGTGTTTCCTGATAAACTCTTCTCAGCCCATCTCTTCCCCAGCAGCACAATCCTCAGCTCTGAGAGACGTTGTGTCTCAGGGGAAGCAGTCTGTCTCCC
>TU127300
TGCCTGGAGGGTGTTCCTTGCTGTTCCTCTTCTTGAGAGGCAGTGTGGattcctctgtctctttctccagTTCCTCTTCCTTCAGTGTCTTTCTCTTCTCCTTcatctcctcttctctcctgcTGCACTCCTCCTCCATCCTCTGTTTCAgctcctcttccctctctctctccctctctctatacttctccttcagctcctcTTCTCTCCTGCTCCACTCCTCCTCCATCTTCTGTTTCAgctcctcttccttctcttcGCACTCCTTTCTGATTTGATctacctctctctttctctcttcatcCCTCTGTTTCTTCTCTTTCACCCTCTGTCTGATCCTCTTTACCATCTCCCAGTTCCTCTCAGTAGTGATGTGCCAGCCCCCGTGTCCTGCCACCATCTCCTCTATCTTGTCCAGCAGCTCTGTGACCTGAGTGCCGTCGCTCCTGTCCCTGTTGTTGAGGACATGATACCTGTTCCCACATTTCTCCACAAGCCGCTGGAgctcctcccctcctctctcaatGTGCTGCTCAATGGTTGTGTCTCTCAGTTTGTCCCCCCAGGTGAACAGCACTATAGTGTGTCTCCAGACTCTCTCACTGAGGAGCTCCAGGTGTTCCTGCACtgatctcctctctctctctatgaatGAGTAACTCCCCACAGGAATGGCCAGGAGGAGAGCGTGGGGTCCCgggggacacagagacacactgcgCACAATCTCCTGTTTAACCAACTCTGGAGTCTCCTGTACAGAATCACTCCACCAGCCTGGTGTGTGGACCACAGTGACCTGCCTCCCGGCCACTTCACCCTGGCTCTTCTCACTCtgctcagtctctctctcagtgttaaACGCCTCTCTGCCCAGGATGGTGTTTCCTGATAAACTCTTCTCAGCCCATCTCTTCCCCAGCAGCACAATCCTCAGCTCTGAGAGACGTTGTGTCTCAGGGGAAGCAGTCTGTCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127298 True 2511 TUCP 0.48 3 31262461 31287766
TU127300 False 979 lncRNA 0.53 2 31267405 31287766

Neighbor

gene id symbol gene type direction distance location
AMCG00015953 NA coding upstream 46364 31204574 ~ 31216097 (+)
AMCG00015949 NA coding upstream 291578 30964716 ~ 30970883 (+)
AMCG00015941 NA coding upstream 871874 30367220 ~ 30390587 (+)
AMCG00015938 NA coding upstream 913028 30346433 ~ 30349433 (+)
AMCG00015937 ldb2,LOC106611552,LOC107756465,LOC107680613 coding upstream 926192 30321510 ~ 30336269 (+)
AMCG00015964 LOC101068172 coding downstream 696203 31983969 ~ 31986525 (+)
AMCG00015968 NA coding downstream 786487 32074253 ~ 32075287 (+)
AMCG00015969 NA coding downstream 790792 32078558 ~ 32080626 (+)
AMCG00015978 NA coding downstream 995673 32283439 ~ 32289880 (+)
AMCG00015977 NA coding downstream 1016214 32303980 ~ 32314500 (+)
G101848 NA non-coding upstream 621111 30595078 ~ 30641350 (+)
G101678 NA non-coding upstream 1533746 29705977 ~ 29728715 (+)
G101638 NA non-coding upstream 1666570 29578529 ~ 29595891 (+)
G101560 NA non-coding upstream 2076134 29186105 ~ 29186327 (+)
G101558 NA non-coding upstream 2079592 29182531 ~ 29182869 (+)
G101964 NA non-coding downstream 385721 31673487 ~ 31674507 (+)
G101965 NA non-coding downstream 390946 31678712 ~ 31679106 (+)
G101966 NA non-coding downstream 395299 31683065 ~ 31683412 (+)
G101969 NA non-coding downstream 419040 31706806 ~ 31707293 (+)
G101970 NA non-coding downstream 428688 31716454 ~ 31717321 (+)
G101870 NA other upstream 453223 30804089 ~ 30809238 (+)
G101752 NA other upstream 1094172 30166028 ~ 30168289 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other upstream 1609523 29624045 ~ 29652938 (+)
AMCG00015901 NA other upstream 2681632 28577500 ~ 28580829 (+)
G101400 NA other upstream 3270447 27890552 ~ 27992014 (+)
AMCG00015959 NA other downstream 446001 31733767 ~ 31746116 (+)
AMCG00015966 NA other downstream 660709 31948475 ~ 31951870 (+)
AMCG00015967 NA other downstream 706364 31994130 ~ 31996026 (+)
G102064 gria2 other downstream 876430 32164196 ~ 32171075 (+)
AMCG00015981 NA other downstream 1094483 32382249 ~ 32397410 (+)

Expression


Co-expression Network