G101964


Basic Information

Item Value
gene id G101964
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 31673487 ~ 31674507 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU127349
TCTTTgcaaatgtctttatttctcCCGAAGGAGCCAGTGGATTGATTTACAGGTCAGGGGGGTTATTTTGGGTTCCCCTTCAACGCAGCATAGAAGCaacattaaactgaaatgaacGAATATGCAAAATCGagattttatacaatatttacatatggagcttaaatgtactttatatttGCCCGCCTGAAAGAACAtcaacaaaaggaaacaaagcatTAAACCTGGGACCAATTTCCCAATTTGAGCTGCATTGTGCTTAATCCATAGGTCTTGTTAAAAAAGGataagggttttatttttcacttggaCCGCAGGCCGGGTAACACCCAGCGGGCGCCGCTTGTGAGGGCGAGGGAACGGGTGCCATCTCGCATTGCTAAGGAACAGAGAGGAGAGCCCTGTTTACAGCCCGAGAGCGTCCCACTGTCTCAGGGTTTCCCCACTCGATCCGAAGATGCCACGGAGCTATGGGCCGAGGTACGAACGTGATGCGCTTGCGCTGCAGAGCGACAGCGGTGCGTTCTCACTGGAGATTCCTGCCGAAACAGGATCGGTTTCATTAACCTGGAGACAGGACTGCAGGAGTGTGCGTgcgtacaaaataaaataaaaactgattaaaaaaattagTTGTTTTAGTCCCCCCCCAAGATAATGCCTCAAGCTGTGGcgattgttttgatttattttaaggtaTAAAATGGAATTTACAAAAGATATCGGGGGTCTGGGCGATCTTTAGATCTACAGATATCTATATAGACACAAACTGGaccaaagaaacaagaaaactaaCTCTGTCGCTGGGAAGAGCCTTCACACTCTCAACTCTTCTattcttacaaaacaaaacaaagacagcacCCCTCATCCCACAGACGGGGGCGGCCCTCAAAGATGATCTCGCGAGGCCCTCGGCTGCAGTCCTGTGTGCTGCGCTCACCAGAGACCGGGCCCCCGCTCAATACCGGGCTGCTTTCTGTGAGGGGAAGCGGCCGTGCGACGGGGGACCGCTGGA

Function

GO: NA

KEGG:

id description
ko00100 Steroid biosynthesis
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU127349 True 1021 lncRNA 0.48 1 31673487 31674507

Neighbor

gene id symbol gene type direction distance location
AMCG00015953 NA coding upstream 457390 31204574 ~ 31216097 (+)
AMCG00015949 NA coding upstream 702604 30964716 ~ 30970883 (+)
AMCG00015941 NA coding upstream 1282900 30367220 ~ 30390587 (+)
AMCG00015938 NA coding upstream 1324054 30346433 ~ 30349433 (+)
AMCG00015937 ldb2,LOC106611552,LOC107756465,LOC107680613 coding upstream 1337218 30321510 ~ 30336269 (+)
AMCG00015964 LOC101068172 coding downstream 309462 31983969 ~ 31986525 (+)
AMCG00015968 NA coding downstream 399746 32074253 ~ 32075287 (+)
AMCG00015969 NA coding downstream 404051 32078558 ~ 32080626 (+)
AMCG00015978 NA coding downstream 608932 32283439 ~ 32289880 (+)
AMCG00015977 NA coding downstream 629473 32303980 ~ 32314500 (+)
G101935 NA non-coding upstream 356795 31273172 ~ 31316692 (+)
G101848 NA non-coding upstream 1032137 30595078 ~ 30641350 (+)
G101678 NA non-coding upstream 1944772 29705977 ~ 29728715 (+)
G101638 NA non-coding upstream 2077596 29578529 ~ 29595891 (+)
G101560 NA non-coding upstream 2487160 29186105 ~ 29186327 (+)
G101965 NA non-coding downstream 4205 31678712 ~ 31679106 (+)
G101966 NA non-coding downstream 8558 31683065 ~ 31683412 (+)
G101969 NA non-coding downstream 32299 31706806 ~ 31707293 (+)
G101970 NA non-coding downstream 41947 31716454 ~ 31717321 (+)
G101979 NA non-coding downstream 59667 31734174 ~ 31734954 (+)
G101930 NA other upstream 385721 31262461 ~ 31287766 (+)
G101870 NA other upstream 864249 30804089 ~ 30809238 (+)
G101752 NA other upstream 1505198 30166028 ~ 30168289 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other upstream 2020549 29624045 ~ 29652938 (+)
AMCG00015901 NA other upstream 3092658 28577500 ~ 28580829 (+)
AMCG00015959 NA other downstream 59260 31733767 ~ 31746116 (+)
AMCG00015966 NA other downstream 273968 31948475 ~ 31951870 (+)
AMCG00015967 NA other downstream 319623 31994130 ~ 31996026 (+)
G102064 gria2 other downstream 489689 32164196 ~ 32171075 (+)
AMCG00015981 NA other downstream 707742 32382249 ~ 32397410 (+)

Expression


Co-expression Network