G101966


Basic Information

Item Value
gene id G101966
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 31683065 ~ 31683412 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU127351
aatctaattggCAGCCTGAAATAATTATAGATAAGAAAACACAGCCTGGTAAGAGAACAGCATTTTTTATGACCCCGCTCAGAGGCCACGTGTTAGTTTGAAGGACTGATGCGACTCACGTCTTCAGCTGCTCCGTGAAGATGTACTCCGTGAAGTCCTTGACCTCTGGGGCAAAGTACATGGTCTCCCGCATCTTGACGTCTTTCTGCGCGATATGCTCGGCCGAGTTGAAGCGCATCACGTAGTAGGGGTGAAAGACTGGGCCGAAGATTTCGAACACCTGAAGGGAGAGGATGGGGAGGGAGAAAAATGACAAGGTGCGTTCCTTCAATCCCTCCAGCACTGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127351 True 348 lncRNA 0.50 1 31683065 31683412

Neighbor

gene id symbol gene type direction distance location
AMCG00015953 NA coding upstream 466968 31204574 ~ 31216097 (+)
AMCG00015949 NA coding upstream 712182 30964716 ~ 30970883 (+)
AMCG00015941 NA coding upstream 1292478 30367220 ~ 30390587 (+)
AMCG00015938 NA coding upstream 1333632 30346433 ~ 30349433 (+)
AMCG00015937 ldb2,LOC106611552,LOC107756465,LOC107680613 coding upstream 1346796 30321510 ~ 30336269 (+)
AMCG00015964 LOC101068172 coding downstream 300557 31983969 ~ 31986525 (+)
AMCG00015968 NA coding downstream 390841 32074253 ~ 32075287 (+)
AMCG00015969 NA coding downstream 395146 32078558 ~ 32080626 (+)
AMCG00015978 NA coding downstream 600027 32283439 ~ 32289880 (+)
AMCG00015977 NA coding downstream 620568 32303980 ~ 32314500 (+)
G101965 NA non-coding upstream 3959 31678712 ~ 31679106 (+)
G101964 NA non-coding upstream 8558 31673487 ~ 31674507 (+)
G101935 NA non-coding upstream 366373 31273172 ~ 31316692 (+)
G101848 NA non-coding upstream 1041715 30595078 ~ 30641350 (+)
G101678 NA non-coding upstream 1954350 29705977 ~ 29728715 (+)
G101969 NA non-coding downstream 23394 31706806 ~ 31707293 (+)
G101970 NA non-coding downstream 33042 31716454 ~ 31717321 (+)
G101979 NA non-coding downstream 50762 31734174 ~ 31734954 (+)
G101997 NA non-coding downstream 144778 31828190 ~ 31828574 (+)
G102043 NA non-coding downstream 382424 32065836 ~ 32067452 (+)
G101930 NA other upstream 395299 31262461 ~ 31287766 (+)
G101870 NA other upstream 873827 30804089 ~ 30809238 (+)
G101752 NA other upstream 1514776 30166028 ~ 30168289 (+)
AMCG00015918 g3bp2,LOC106578160,LOC107714642,LOC106610282 other upstream 2030127 29624045 ~ 29652938 (+)
AMCG00015901 NA other upstream 3102236 28577500 ~ 28580829 (+)
AMCG00015959 NA other downstream 50355 31733767 ~ 31746116 (+)
AMCG00015966 NA other downstream 265063 31948475 ~ 31951870 (+)
AMCG00015967 NA other downstream 310718 31994130 ~ 31996026 (+)
G102064 gria2 other downstream 480784 32164196 ~ 32171075 (+)
AMCG00015981 NA other downstream 698837 32382249 ~ 32397410 (+)

Expression


Co-expression Network