AMCG00016010


Basic Information

Item Value
gene id AMCG00016010
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 187079 ~ 196898 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016010
TTTTACGGCAATATAGGATGAGGCTGTCATCTCTGCGGGAATAGGGGGAGACCTGCctggtttatttttcaacagtTTGAATTTGTTGATATCTAAACAAATAGTTGTCAGGTGTCAAGTCATGTACAATAACCATAACGAGGCCGACAAGACCGTGTTTGTGGGAAATTTAGATAGCTGTGTAAAAGAGGAGATCCTGTTCGAGCTCTTCCTGCAGGCTGGGCCTTTGACAAGAGTTACCATTGCAAAAGATAAGGATGGGAAGCAGAAATCCTATGGCTTCGTCTGCTACAAGCACAGGGAGGCCGTGCCCTATGCCATAGCACTGCTCAACGGAATCCGCTTATATGGACGGCCAATTAAACTTCAGTACAGATTTGggaGTTCCCACAGTGATGTAGACATGGTTCTCCCTTCCATGGAAAGCAGTCCAAGTAAAGTGTTACCAGATACTTTTAGGACTGGTAATTACCAGGAGCCTCCTCTATTCCCAAACTCCACATTAACTGTCAACAGCTGCAACTCTCAAGAGTATGTCTACTTTCAAAATATGaTATCTGGTTTTCCTGTACAACAGTATTCAATGGATTCCCAGATGGCCATGCAACAGTATTATCTTCCTAATGCCTTGTCCCAGCAATCCTCCATGACATCTATGCCCTGGTCTGCTCAAGGCTTCCTAGCTGGCTCAAGCTATTCCTGTTggccacacacacaaccagtGCAGACTGGAGTAAACTCAAAATGTACAGCTCTTAGCCAGGAGAGTGAGGGTCAAGTAGAAAATCAAAGCAGCAGAGACCAAAGTAAGGAAAGAAGGTATAAAAAGAGACGGGATTCCAAAAATGTGTATAAGAAGCACagaagtaaatgtaaaatgtgacaATTGTTTGGAAACATATTCCATTTTGTGAATGCACCTTATACATTTAAGGGGAAGAAAACCCTTAATCGATGCACTATGAATTTAAGATTATTTAGGTTTTCTTATAACAGATCCAAAGCAATGTTCAGAAAGTTAGTACAGATACTTTAACAACAAATGATTAAATGTCCCAAAGGTCACATTGTcttttgcaaaaataataaaactatacCTTAATGAGCTCTTGAACACATGTGTACATGGCATAGCCTACATTAAAGTTTATCCCCTGTGACAATGACAATGCACTTACACTGGTCAATTATTTTTGCAACTTGCACAACCTTGGCCAGGTGTTCATTTTTGTATATGGAGGTGCCTGTCAGAGAACACTTGTTTCCTCATGGATTAAAGTGGCATGCATACTCTGTTCTCTGTAGTATGTGAAGTGAACAAGTGGTGCCTACatctaatgaaaatgtttttttctttgtgaacaagaatatatttataaaagggTTCTTTCGAGGTGGTGAGCATGAATATTTCCACACTTTAATGGAAAGACTAAGAAAGAGTTGTCATAAAATGGTGTTAAATATTACATGTTACCATttaggtttatttaaaataattattactttattattatattgttattattttcaaacattggTTTTT

Function

GO: NA

KEGG:

id description
K25005 RBM11; splicing regulator RBM11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016010 True 1546 mRNA 0.39 5 187079 196898

Neighbor

gene id symbol gene type direction distance location
AMCG00016012 NA coding downstream 5542 159706 ~ 181537 (-)
AMCG00016013 NA coding downstream 33106 149601 ~ 153973 (-)
AMCG00016011 NA coding downstream 73514 90982 ~ 113565 (-)
AMCG00016018 NA coding upstream 1066637 1263535 ~ 1312085 (-)
AMCG00016020 robo1 coding upstream 1116881 1313779 ~ 1341211 (-)
AMCG00016019 robo1,LOC106613191 coding upstream 1262174 1459072 ~ 1459832 (-)
AMCG00016023 NA coding upstream 2266173 2463071 ~ 2515080 (-)
AMCG00016022 NA coding upstream 2322645 2519543 ~ 2527277 (-)
G10214 NA non-coding upstream 3381 200279 ~ 201116 (-)
G10229 NA non-coding upstream 74023 270921 ~ 271523 (-)
G10233 NA non-coding upstream 125731 322629 ~ 323000 (-)
G10298 NA non-coding upstream 1336503 1533401 ~ 1533655 (-)
G10307 NA non-coding upstream 1499907 1696805 ~ 1705596 (-)
AMCG00016024 ilk,LOC106581335 other upstream 2335719 2532617 ~ 2554946 (-)
G10420 LOC101154678 other upstream 2513501 2710399 ~ 2710685 (-)
AMCG00016029 NA other upstream 2587227 2784125 ~ 2846357 (-)
G10478 NA other upstream 2837524 3034422 ~ 3035183 (-)
AMCG00016046 NA other upstream 3331944 3528842 ~ 3542536 (-)

Expression


Co-expression Network